Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1171 |
Symbol | |
ID | 5057621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 1310942 |
End bp | 1312576 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640473440 |
Product | methyltransferase type 11 |
Protein accession | YP_001158019 |
Protein GI | 145593722 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0492] Thioredoxin reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.795011 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGATA GAACCTTCCC GCCGATCGAA CGTCGCTGCG ATGTCGCCGT CATCGGCGGA TCGGCTGCCG GCCTCGCCGC CGCGCTTCAG CTCGCGGGCC AGCGCAGGTC GGTGATCGTG ATCGATGATG GAGCGTCCCG CGACGCTCCC GCCGAGCGCC TGCACGGCTA CCTCGGCCGC GAAGGCGTCC CGCCAGCCGA GATCCTCGCT ACCGGCCGTG AGGAAGCCCG CAGCTACGGC GTCGAGGTGC TGACCGGTCA CGTGGAACGC ATCACCCGCA TGCCGGATGG TCGCTTTCGG GCCGAACTCG CCAGCGGTCA CTCCATCATC GCTCGTCGGG CCCTCGCGGC CATCGGGCTG GTGGACGAGC TTCCGGACAT CGACGATCTT GATCAGCACT GGGGCCGTGA CGTCATACAC TCTCCGTTCG GTCGCGGTTT TGAGGTCCGA GACGGGCGCA TAGTCCAGAT CGTTACCCAT CCGGGAGGGC TGCGCACGAC CGAGTTGTTT CGTCACCTCA GTGCGCAGCT CACCGTCGTG CTCCACGGCG ATGTCCCTGT GGAGGAGGCC GAGGTCGATG TTCTGCGGGC CAGCGGTGTG GCCGTCGTAC CGGGGTTCGT GACCGGGCTC ACCACCAATG ACGTCGGTCG TATCGAAGCC GTCCGACTCG CCAACCACGA CGACATCGAC GCCGACACGG TCGTGGTGAC GCCACGGTTC CACGTACGCG CCGAACCGTT CGCGCCGCTC GGTCTGCAAC CGGCCTCGCA CCCCACCGGG CTCGGGCGCT TCCTGGAAAC GGACGCGACC GGGGCGACTG CAGTTCCCGG CCTCTATGCC GCAGGCAACG CGACCGACCC GAGCCAGCAG CTACTGCAGG CCGCCGCCCA CGGCAGCCAG GTCGGTGCCG CGATCAGCTG GAGTCTCGCC CACGACGACA GCCGGGCCAC GGCGCAACCA CCTTCGAACC AGGCGGACTG GGATCATCGA TACAGTAGCG ACCAGATCTG GAGCGGCAAC CCGAACGGCA CTCTCGTCCA CGAGGTCACG GGCCTCACGC CACGCCGCGC GCTCGATGTT GGGGCTGGCG AGGGCGCCGA CGCGCTCTGG CTTGCCGAAC AGGGATGGAA GGCTACCGCG AGTGACATCT CGCCGCGCGC GCTGGACCAC GTCAGCGCGG TAGCCCGGCA CCGGGGTCTC CCCGTCGAGT GCCATCGGGC GGACGCGAAC GCGTTGGACG CCTTCGAGTC AGCGGCGTTC GAACTCGTGT CTGCGCAGTA CGCCTCCATC CCTCGCACAC CCGATGGGCG GGGGATCCAC AATCTGTTGA ATGCCGTTGC CCCCGGTGGC ACGTTGCTCG TGGTCAGCCA CGATCGTGCG CCGAGTCGTA CGTCGCTCGA TTCGGCCCAC ATGCCACCGT TCGACCCGGA CGCATACCTC CGTGTCGACG ACTTCGCCAC CGCGCTCGCG GGCTCAGTCG GCTGGGACAT CGAGGTACAC GACAAGCGAC TCCGACCCCC AGGGGCGGCC TCCGCGTCCC ACCACGTCCA CGACGTGGTC CTGCGGGCCC GCCGTACGAC GGCTGGCGAT CCTGGCCGTG GTCTGCTGGG CGGTGACCAC CTCGGGGCGT CATAG
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Protein sequence | MSDRTFPPIE RRCDVAVIGG SAAGLAAALQ LAGQRRSVIV IDDGASRDAP AERLHGYLGR EGVPPAEILA TGREEARSYG VEVLTGHVER ITRMPDGRFR AELASGHSII ARRALAAIGL VDELPDIDDL DQHWGRDVIH SPFGRGFEVR DGRIVQIVTH PGGLRTTELF RHLSAQLTVV LHGDVPVEEA EVDVLRASGV AVVPGFVTGL TTNDVGRIEA VRLANHDDID ADTVVVTPRF HVRAEPFAPL GLQPASHPTG LGRFLETDAT GATAVPGLYA AGNATDPSQQ LLQAAAHGSQ VGAAISWSLA HDDSRATAQP PSNQADWDHR YSSDQIWSGN PNGTLVHEVT GLTPRRALDV GAGEGADALW LAEQGWKATA SDISPRALDH VSAVARHRGL PVECHRADAN ALDAFESAAF ELVSAQYASI PRTPDGRGIH NLLNAVAPGG TLLVVSHDRA PSRTSLDSAH MPPFDPDAYL RVDDFATALA GSVGWDIEVH DKRLRPPGAA SASHHVHDVV LRARRTTAGD PGRGLLGGDH LGAS
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