Gene Strop_1171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1171 
Symbol 
ID5057621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1310942 
End bp1312576 
Gene Length1635 bp 
Protein Length544 aa 
Translation table11 
GC content68% 
IMG OID640473440 
Productmethyltransferase type 11 
Protein accessionYP_001158019 
Protein GI145593722 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.795011 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGATA GAACCTTCCC GCCGATCGAA CGTCGCTGCG ATGTCGCCGT CATCGGCGGA 
TCGGCTGCCG GCCTCGCCGC CGCGCTTCAG CTCGCGGGCC AGCGCAGGTC GGTGATCGTG
ATCGATGATG GAGCGTCCCG CGACGCTCCC GCCGAGCGCC TGCACGGCTA CCTCGGCCGC
GAAGGCGTCC CGCCAGCCGA GATCCTCGCT ACCGGCCGTG AGGAAGCCCG CAGCTACGGC
GTCGAGGTGC TGACCGGTCA CGTGGAACGC ATCACCCGCA TGCCGGATGG TCGCTTTCGG
GCCGAACTCG CCAGCGGTCA CTCCATCATC GCTCGTCGGG CCCTCGCGGC CATCGGGCTG
GTGGACGAGC TTCCGGACAT CGACGATCTT GATCAGCACT GGGGCCGTGA CGTCATACAC
TCTCCGTTCG GTCGCGGTTT TGAGGTCCGA GACGGGCGCA TAGTCCAGAT CGTTACCCAT
CCGGGAGGGC TGCGCACGAC CGAGTTGTTT CGTCACCTCA GTGCGCAGCT CACCGTCGTG
CTCCACGGCG ATGTCCCTGT GGAGGAGGCC GAGGTCGATG TTCTGCGGGC CAGCGGTGTG
GCCGTCGTAC CGGGGTTCGT GACCGGGCTC ACCACCAATG ACGTCGGTCG TATCGAAGCC
GTCCGACTCG CCAACCACGA CGACATCGAC GCCGACACGG TCGTGGTGAC GCCACGGTTC
CACGTACGCG CCGAACCGTT CGCGCCGCTC GGTCTGCAAC CGGCCTCGCA CCCCACCGGG
CTCGGGCGCT TCCTGGAAAC GGACGCGACC GGGGCGACTG CAGTTCCCGG CCTCTATGCC
GCAGGCAACG CGACCGACCC GAGCCAGCAG CTACTGCAGG CCGCCGCCCA CGGCAGCCAG
GTCGGTGCCG CGATCAGCTG GAGTCTCGCC CACGACGACA GCCGGGCCAC GGCGCAACCA
CCTTCGAACC AGGCGGACTG GGATCATCGA TACAGTAGCG ACCAGATCTG GAGCGGCAAC
CCGAACGGCA CTCTCGTCCA CGAGGTCACG GGCCTCACGC CACGCCGCGC GCTCGATGTT
GGGGCTGGCG AGGGCGCCGA CGCGCTCTGG CTTGCCGAAC AGGGATGGAA GGCTACCGCG
AGTGACATCT CGCCGCGCGC GCTGGACCAC GTCAGCGCGG TAGCCCGGCA CCGGGGTCTC
CCCGTCGAGT GCCATCGGGC GGACGCGAAC GCGTTGGACG CCTTCGAGTC AGCGGCGTTC
GAACTCGTGT CTGCGCAGTA CGCCTCCATC CCTCGCACAC CCGATGGGCG GGGGATCCAC
AATCTGTTGA ATGCCGTTGC CCCCGGTGGC ACGTTGCTCG TGGTCAGCCA CGATCGTGCG
CCGAGTCGTA CGTCGCTCGA TTCGGCCCAC ATGCCACCGT TCGACCCGGA CGCATACCTC
CGTGTCGACG ACTTCGCCAC CGCGCTCGCG GGCTCAGTCG GCTGGGACAT CGAGGTACAC
GACAAGCGAC TCCGACCCCC AGGGGCGGCC TCCGCGTCCC ACCACGTCCA CGACGTGGTC
CTGCGGGCCC GCCGTACGAC GGCTGGCGAT CCTGGCCGTG GTCTGCTGGG CGGTGACCAC
CTCGGGGCGT CATAG
 
Protein sequence
MSDRTFPPIE RRCDVAVIGG SAAGLAAALQ LAGQRRSVIV IDDGASRDAP AERLHGYLGR 
EGVPPAEILA TGREEARSYG VEVLTGHVER ITRMPDGRFR AELASGHSII ARRALAAIGL
VDELPDIDDL DQHWGRDVIH SPFGRGFEVR DGRIVQIVTH PGGLRTTELF RHLSAQLTVV
LHGDVPVEEA EVDVLRASGV AVVPGFVTGL TTNDVGRIEA VRLANHDDID ADTVVVTPRF
HVRAEPFAPL GLQPASHPTG LGRFLETDAT GATAVPGLYA AGNATDPSQQ LLQAAAHGSQ
VGAAISWSLA HDDSRATAQP PSNQADWDHR YSSDQIWSGN PNGTLVHEVT GLTPRRALDV
GAGEGADALW LAEQGWKATA SDISPRALDH VSAVARHRGL PVECHRADAN ALDAFESAAF
ELVSAQYASI PRTPDGRGIH NLLNAVAPGG TLLVVSHDRA PSRTSLDSAH MPPFDPDAYL
RVDDFATALA GSVGWDIEVH DKRLRPPGAA SASHHVHDVV LRARRTTAGD PGRGLLGGDH
LGAS