Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1169 |
Symbol | |
ID | 5057619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 1309287 |
End bp | 1309964 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640473438 |
Product | regulatory protein, TetR |
Protein accession | YP_001158017 |
Protein GI | 145593720 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGGGTGA GCGCGACACC ACGCCGCGGA GGCCGGCAGG CACCCGCGAA GACACACAAC GAGGACGGCA GAACCGCGCG ATCCCGGTCC ACCCGGGCGC GCATCATGGC GGCGGCCACC GAGCTGTTCA CCACTGCCGG CTACGGCGCC ACCAGCATCG CGGCCATCGC CGCCAGGGCC CGCGTGAGCG AACAGAGCGT CTACTACAGC TTCGGCACCA AGCGGGCCAT CCTCACCGCG GCCCTCGACC TGGCCATCGC CGGCGACGAC GAACCCGTTC CCACACTTGA GCGGCCTTGG GTGCGTGCCG CGCTGGCCGA CCCGGATCCG CGCGAGCAGA TCCGCCGGCA GGTTGCCGGT GCCGCGGACA TCTACCGGCG CGCCGCACCA CTGTTGGATG TCGTACGCGG CGCGGCCACC GCCGACGCGG ATCTGGTCGA GGCGTGGGCT ACCAACCTGG AGCAGCGGCT CACCGTCCAA CGCGTCTTCG CCGACGCGCT GGCCCGCAAG ACACCGCTGC CCGCCGGCAT GACCGTCGAC GTGGCCGCCG ACACCGCCCT GGCCATTCTC AGCCCCGAGA CATACCACCT GCTCGTGCAC CATCAGGGCT GGGAACACAC GCGATGGCAG GACTGGGCCG CGAACGCGTT GCAACGCCTG CTCACGACGC TGCCGTAG
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Protein sequence | MRVSATPRRG GRQAPAKTHN EDGRTARSRS TRARIMAAAT ELFTTAGYGA TSIAAIAARA RVSEQSVYYS FGTKRAILTA ALDLAIAGDD EPVPTLERPW VRAALADPDP REQIRRQVAG AADIYRRAAP LLDVVRGAAT ADADLVEAWA TNLEQRLTVQ RVFADALARK TPLPAGMTVD VAADTALAIL SPETYHLLVH HQGWEHTRWQ DWAANALQRL LTTLP
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