Gene Strop_1169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1169 
Symbol 
ID5057619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1309287 
End bp1309964 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content71% 
IMG OID640473438 
Productregulatory protein, TetR 
Protein accessionYP_001158017 
Protein GI145593720 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGGTGA GCGCGACACC ACGCCGCGGA GGCCGGCAGG CACCCGCGAA GACACACAAC 
GAGGACGGCA GAACCGCGCG ATCCCGGTCC ACCCGGGCGC GCATCATGGC GGCGGCCACC
GAGCTGTTCA CCACTGCCGG CTACGGCGCC ACCAGCATCG CGGCCATCGC CGCCAGGGCC
CGCGTGAGCG AACAGAGCGT CTACTACAGC TTCGGCACCA AGCGGGCCAT CCTCACCGCG
GCCCTCGACC TGGCCATCGC CGGCGACGAC GAACCCGTTC CCACACTTGA GCGGCCTTGG
GTGCGTGCCG CGCTGGCCGA CCCGGATCCG CGCGAGCAGA TCCGCCGGCA GGTTGCCGGT
GCCGCGGACA TCTACCGGCG CGCCGCACCA CTGTTGGATG TCGTACGCGG CGCGGCCACC
GCCGACGCGG ATCTGGTCGA GGCGTGGGCT ACCAACCTGG AGCAGCGGCT CACCGTCCAA
CGCGTCTTCG CCGACGCGCT GGCCCGCAAG ACACCGCTGC CCGCCGGCAT GACCGTCGAC
GTGGCCGCCG ACACCGCCCT GGCCATTCTC AGCCCCGAGA CATACCACCT GCTCGTGCAC
CATCAGGGCT GGGAACACAC GCGATGGCAG GACTGGGCCG CGAACGCGTT GCAACGCCTG
CTCACGACGC TGCCGTAG
 
Protein sequence
MRVSATPRRG GRQAPAKTHN EDGRTARSRS TRARIMAAAT ELFTTAGYGA TSIAAIAARA 
RVSEQSVYYS FGTKRAILTA ALDLAIAGDD EPVPTLERPW VRAALADPDP REQIRRQVAG
AADIYRRAAP LLDVVRGAAT ADADLVEAWA TNLEQRLTVQ RVFADALARK TPLPAGMTVD
VAADTALAIL SPETYHLLVH HQGWEHTRWQ DWAANALQRL LTTLP