| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1152 |
|---|
| Symbol | |
|---|
| ID | 5057602 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 1294474 |
|---|
| End bp | 1295835 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640473421 |
|---|
| Product | Na+/H+ antiporter NhaA |
|---|
| Protein accession | YP_001158000 |
|---|
| Protein GI | 145593703 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3004] Na+/H+ antiporter |
|---|
| TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCCA CCAGACGAGA TCTCCCACCC GGATCCGTCG TACGACGCCG CACCGACCGC
ATCGCCGATG TCCTACGGGC AGAGACGACC GGTGGCGCGC TCCTGCTCGC CGGAGCCGTC
ATCGCGCTCA TCTGGGCCAA CTCGCCCGGG GCTGCCGGCT ACGACGCCAT GCGCTCGTTC
ACCGTCGGTC CCGCCTGGCT GCACCTGGAT CTGTCGCTGG CGGCGTGGGC CAAGGACGGC
CTGCTGGCCG TCTTCTTCTT CGTCGCCGGG CTGGAACTCA AACGCGAGTT CGTGACCGGT
GAACTCCGGC AGCCGCGCCG CGCCGCGGTG CCCATCGCCG CCGCCGTCGG CGGTGTGCTG
GCACCCGCAG CCGTCTACGT TCTGATCACT GCCGCCGCCG AAGCCGACGC CCTGCGCGGC
TGGGCCATCC CCGCCGCCAC CGACATCGCC TTCGCCCTGG CGGTACTCGC CGTCATCGGC
CGGCACCTGC CGCCGGCCGT CCGGGTCTTC CTGCTCACCC TGGCGGTGGT CGACGACCTG
ATCGCCATCA TGATCATCGC TGTCTTCTAC ACCGCCAACC TGTCGGTCAC GCCGCTGCTG
GCCACCGCCC TACCGCTGGT TGCCTTCGCG ATCCTGCTGC GACGCCGCGT CACCTCCGTC
TGGCTGCTCC TGCCGCTGGC CCTCACCACC TGGGCGCTCG TGCACGCCTC CGGCGTGCAC
GCCACCGTCG CCGGAGTCCT GCTCGCCCTC GTCGTACCCG CCCGGCCCCA CTCCCAGCAC
GAGCACACCG CCGCGCCCAG CCTGCTCGAA CGCTTCGAAC ACGCCATCAA ACCGGTCTCC
GCCGGCCTGG CCGTACCCGT CTTCGCGTTG ATGTCAGCCG GGGTCGCCAT AGGTGGCCTG
GGCGGGCTGG TATCCGCCCT CACCGATCCG GTCGCCATCG GCGTCATCGC CGGGCTCGTC
ATCGGCAAGC CCCTCGGTGT CATCGCCGTC ACCTGGCTCG TCACCCGCCT CACCCGAACA
GGTCTCGGCA ACAATCTGAC CTGGACCCAC ATCACCGGAC TGTCCATGCT CGCCGGAATC
GGCTTCACCG TCTCCCTGCT CATCGGTGAG CTCTCCTTCG CCGCCGGCAC CGAACGCCAT
GACCACGTCA AGATCGCCAT CGTCACCGGG TCGCTGATCG CCGCCGTTCT CGCCGCCGTC
ATCCTGCGCC TGCCCAACCG CGCCGGCTCA CGCGGCAACG ACGCCACAAC CCGCGACCCC
GACCAGACCC GAGTCGGTAC GGCCACTCAG CGCACCACAC CAGATCACCC GACTCCGGCA
GCCACGGACG CGAACCAGCC GGCGCGATCC CCAGCACCAT GA
|
|---|
| Protein sequence | MDATRRDLPP GSVVRRRTDR IADVLRAETT GGALLLAGAV IALIWANSPG AAGYDAMRSF
TVGPAWLHLD LSLAAWAKDG LLAVFFFVAG LELKREFVTG ELRQPRRAAV PIAAAVGGVL
APAAVYVLIT AAAEADALRG WAIPAATDIA FALAVLAVIG RHLPPAVRVF LLTLAVVDDL
IAIMIIAVFY TANLSVTPLL ATALPLVAFA ILLRRRVTSV WLLLPLALTT WALVHASGVH
ATVAGVLLAL VVPARPHSQH EHTAAPSLLE RFEHAIKPVS AGLAVPVFAL MSAGVAIGGL
GGLVSALTDP VAIGVIAGLV IGKPLGVIAV TWLVTRLTRT GLGNNLTWTH ITGLSMLAGI
GFTVSLLIGE LSFAAGTERH DHVKIAIVTG SLIAAVLAAV ILRLPNRAGS RGNDATTRDP
DQTRVGTATQ RTTPDHPTPA ATDANQPARS PAP
|
|---|
| |