Gene Strop_1138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1138 
Symbol 
ID5057588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1283449 
End bp1284507 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content71% 
IMG OID640473408 
Producthypothetical protein 
Protein accessionYP_001157987 
Protein GI145593690 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCCG CCGCGATCCT GCCCAGCCGC AACGAGCCAG CCACCATCGC CGCGGTCACC 
ACCGCCGTTG ACACCGCGCT CGCCGAGCAC CGGTCCGTCA TCGTCCACGC CGACTCCTCC
GACACCCCTG CGACCGCCGA CCAGTTCACC GCCACCGCCA CCCAGGCGGC CAAGGTGCCG
CTGACCGGCC TGATCCGGGG CAAGGGTGCC CAGATCCTGG CCGCAGCCCA CCTTCCGGAC
CTCACTGGCA TCGATGCCGT ACTGATCGCG GACACCGATA CCCGGGGCCC CGATCCGGCC
GTCTACGCCG CGCTCCTGGA CCACGTACGG GCTGGGGCCG CCATAGCAGT CGCGGACTAC
CCGCGGCACT GGGACGAAGC CAACCTCACC AACCACCTTG CCCGCCCCCT AATTGCCGCC
ACCACCGGCC ACGACGTGCC CCAGCCGCTC GCCGGGGACC TCGCCCTCTC CCGACCCGCC
CTGGACGCCG CCCTCCGCGC TGCCCGGGCG CTGCCTGTAG AGGTTTCGGC GTGCGTGGAC
GGCTACGGCA TCGACGCATT CCTGCTGCTG ACCGCCGCCA CCGTCGGGCC CATCGCCTCC
GTGCGATTCG ACCAGCCCAA GCAGCACGCC GGGTCCTTTG CTCACCTGGC GGCCATCTAT
CACCAGGCTG TCCCTGTCCT GTTGCACCTG ACCAGGACAG GTAAACCGCC ACCGGCTACG
TCAGGCGGTG CGACGGCGCA CTACCGGGTC GCTGACCGCG CCCTGGAGCC CGCCCGCCTT
TCGGACATGC TCACCACGCT GGACAGCTTC GGCCCGTATC CCGGCGGATA CGATGAACAC
CCATGGCCAG AGCCCGTCGC GGACGCCTGG CGCACCGTGA ACTCCGGTAC ACCAGCGCCC
GACGCGGCCC GTCAGCTGTG GCCGCATTAC CTACGGCGCG TGACCGACTG GTTGACCAGG
GGACCACGCG CCAGCACACG GCAGCGGGCC GAGACACTCG CCGCCGGACA CGCCCGCCTG
TGCATCGCTG TCCTCACTCC CGCAGGAGCC CGACGATGA
 
Protein sequence
MNSAAILPSR NEPATIAAVT TAVDTALAEH RSVIVHADSS DTPATADQFT ATATQAAKVP 
LTGLIRGKGA QILAAAHLPD LTGIDAVLIA DTDTRGPDPA VYAALLDHVR AGAAIAVADY
PRHWDEANLT NHLARPLIAA TTGHDVPQPL AGDLALSRPA LDAALRAARA LPVEVSACVD
GYGIDAFLLL TAATVGPIAS VRFDQPKQHA GSFAHLAAIY HQAVPVLLHL TRTGKPPPAT
SGGATAHYRV ADRALEPARL SDMLTTLDSF GPYPGGYDEH PWPEPVADAW RTVNSGTPAP
DAARQLWPHY LRRVTDWLTR GPRASTRQRA ETLAAGHARL CIAVLTPAGA RR