| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1121 |
|---|
| Symbol | |
|---|
| ID | 5057569 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 1264606 |
|---|
| End bp | 1265130 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640473389 |
|---|
| Product | DoxX family protein |
|---|
| Protein accession | YP_001157970 |
|---|
| Protein GI | 145593673 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.899235 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTGA CCACATCGAG CAGCCGCTTT GCCCGCTGGC CGATCGTCCG CCCGTGGATC
GGCCTCGCCG CCCGACTCGG CCTGGCCGCG GTCTGGCTCC TCGCCGGGGC GTCCAAGGTT
GGGGACCTCG CCGCCTCCGG CCGGGCCGTG AACGCGTACC AGGTCTTCCC GTACGACGTG
GCGGCCGTGA TCGGCGCCGC GTTGCCCTTT GTCGAGCTGA CCCTCGGCGT ACTCGTGCTG
CTCGGGTTGG CGACCCGGCT GACCGCCGGG GTGTCCGTGG CGCTGCTGCT GGTCTTCATC
GCCGGCATCG TCTCGGCCTG GACGCGCGGG CTGACCATCG ACTGCGGCTG TTTCGGCATC
GGCGGCGAGC TGGCCGAGGG GCAGACCCCG AGCTACCTCC CGGAGATCCT CCGGGACCTG
GGATTCCTGG CGCTGGCCGG GTTCCTGTTG ATCTGGCCCC GCACCCCGTT CTCGGTGGAC
GGCTGGTTGA TGGGCGAACG TGCAGTGGAG GACGAGGATG AGTAG
|
|---|
| Protein sequence | MSVTTSSSRF ARWPIVRPWI GLAARLGLAA VWLLAGASKV GDLAASGRAV NAYQVFPYDV
AAVIGAALPF VELTLGVLVL LGLATRLTAG VSVALLLVFI AGIVSAWTRG LTIDCGCFGI
GGELAEGQTP SYLPEILRDL GFLALAGFLL IWPRTPFSVD GWLMGERAVE DEDE
|
|---|
| |