| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1104 |
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| Symbol | rph |
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| ID | 5057551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1248990 |
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| End bp | 1249715 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640473371 |
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| Product | ribonuclease PH |
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| Protein accession | YP_001157953 |
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| Protein GI | 145593656 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0689] RNase PH |
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| TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.97035 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGCGAC CTGACGGGCG GCTGCCCGAC CACCTCCGAC CGGTGACCCT GACCCGCGGC
TGGAGCACCC ATCCCGAAGG CTCTGTGCTG GTGGAGTTCG GCGCCACCCG GGTGCTCTGT
ACCGCGAGCG TCACCGAGGG GGTGCCCCGC TGGCGCAAGG GCTCCGGGCT TGGCTGGGTC
ACCGCCGAGT ACGCGATGCT GCCCCGCGCC ACCAACACCC GCTCGGACCG GGAGAGTGTC
AAGGGGCGGG TCGGTGGGCG TACCCACGAG ATCTCCCGGC TGATCGGTCG TAGCCTGCGC
GCGTCGATCG ACCTGAAGGC ACTGGGCGAG AACTCCATCG TGCTCGACTG CGACGTGCTC
CAGGCCGACG GCGGCACCCG CACCGCCGCG ATCACCGGCG CGTACGTGGC GCTGCACGAC
GCGGTGACCT GGCTCGCCGC CCGTCGCTCC CTCGCCGGTC GGCCGGAGAC GGTGATGCAC
CGCTCGGTCG CGGCGGTGAG TGTCGGTGTC GTCGCCGGTG AGCCGCGGCT GGACCTCAAC
TACGCTGAGG ACGCGTCCGC CGAGGTCGAC CTGAACGTGG TCTGCACCGG CGCCGGTGAC
TTCGTCGAGG TGCAGGGCAC CGGTGAGGCG GGCGTCTTCA GCCGCGGACA GCTCGACGCC
CTACTCGACC TGGCCGTCGC CGGCTGTGTG GAGTTGGCCG AAGCCCAGCG GAAGGCGCTC
TCGTGA
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| Protein sequence | MARPDGRLPD HLRPVTLTRG WSTHPEGSVL VEFGATRVLC TASVTEGVPR WRKGSGLGWV
TAEYAMLPRA TNTRSDRESV KGRVGGRTHE ISRLIGRSLR ASIDLKALGE NSIVLDCDVL
QADGGTRTAA ITGAYVALHD AVTWLAARRS LAGRPETVMH RSVAAVSVGV VAGEPRLDLN
YAEDASAEVD LNVVCTGAGD FVEVQGTGEA GVFSRGQLDA LLDLAVAGCV ELAEAQRKAL
S
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