Gene Strop_1100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1100 
Symbol 
ID5057547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1246114 
End bp1246602 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content67% 
IMG OID640473367 
ProductMov34/MPN/PAD-1 family protein 
Protein accessionYP_001157949 
Protein GI145593652 
COG category[R] General function prediction only 
COG ID[COG1310] Predicted metal-dependent protease of the PAD1/JAB1 superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.952576 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGAGTA TCGACCGGGC GATTGTTGAC GCGATCGTCG CCCACGCCCG TCGGGACCAC 
CCCGACGAGG CGTGTGGCGT GGTCGCCGGT CCCGCTGGTA GCGACACTGC CACTCGGCAC
ATCCCGATGG AGAACGCCGC CCGTTCCATG ACGTTCTACG AGTTCGACTC GATGGAGCAT
CTGCGGGTGT GGCGGGAGAT GGACGACCGG GACGAGGTGC CCGTCGTCAT CTACCACTCG
CACACCGCGA CCGAGGCGTA CCCATCGCGC ACCGACGTCT CCTTCGCCGG TGAGCCCGAC
GCGCACTACC TGCTCGTCTC CACCCGTGAG CCCGACTCCG AGGAGATTCG CTCCTTCCGG
ATCGTGGATG GCGTGGTTAC TGAGGAGAAG GTCCGCATCC TGGACGCCGG GGTGGACCCG
CACGCCGTGC AGTCCTACAT GTTCGGGCAG AGCCCGGCGA CGGTCGACTA CGAGTGTTCT
GGCCGCTGA
 
Protein sequence
MLSIDRAIVD AIVAHARRDH PDEACGVVAG PAGSDTATRH IPMENAARSM TFYEFDSMEH 
LRVWREMDDR DEVPVVIYHS HTATEAYPSR TDVSFAGEPD AHYLLVSTRE PDSEEIRSFR
IVDGVVTEEK VRILDAGVDP HAVQSYMFGQ SPATVDYECS GR