| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1094 |
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| Symbol | |
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| ID | 5057541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1239717 |
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| End bp | 1241651 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640473361 |
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| Product | cytochrome-c oxidase |
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| Protein accession | YP_001157943 |
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| Protein GI | 145593646 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.284884 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTTCAC CCGGGTGTTC TCCCCGAGGT GGGTCGCGGG TACGCGAGCC GTGGCCCGGC
AGGGTACCCG GCCACCCCAC GCAGCCGGGT CACCTGTCGG GGACTATCCT CCTTGCGGAT
GACGGCCGCT TACCGCACAG CGTGCCGAGC GGGACAACCC AGAACCGGAG GCCACTCGTG
ACCACCGTCG CACCCAAGCC GGTCGTGACC CGGCCCTGGC CGGTCCGAGC GCCGGTTAAG
GGGTCGGCCT TCGCGCGGCT GCTGCGCACC ACGGACGCGA AGCAAATCGG GATCATGTAT
ATGGTCACCG CGTTCGCGTT CTTCATGATC GGCGGGCTGA TGGCCCTGAT CATGCGGGCC
GAGCTGGCGC GACCCGGGCT GCAGTTCCTG TCGCCCGAGC AGTTCAACCA GCTGTTCACG
ATGCATGGCA CGATCATGCT GTTGTTCTTC GCGACGCCGA TCGTCTTCGC TTTCGGTAAC
TACCTCGTGC CGATCCAGAT CGGCGCCCCG GATGTCTCGT TCCCGCGGCT GAACAGCTTC
GCCTACTGGC TCTTCCTCTT CGGCGGCACC CTGACCACCG CTGGCTTCAT CACTCCGGGC
GGCGCTGCTG ACTTCGGCTG GTTCGCCTAC ACCCCGCTGA GCAGCGTGGA GCACTCTCCG
GGTGTGGGCG CCAACATGTG GGTCGTCGGT CTGGCGATCT CTGGCCTGGG CACGATCCTC
GGCTCGGTCA ACATGATCAC CACGATCCTG ACCCTCCGCG CGCCCGGCAT GACCATGTTC
CGGATGCCGA TCTTCACCTG GAACATGCTG GTCACCAGCC TGCTGGCGCT GTTGATCTTC
CCGCTGCTGG CCGCCGCGCT CTTCGCGCTC GCCGCCGACC GCATCCTCGG TGCCCACGTG
TACGACCCGG CGACCGGTGG GCCGCTGCTC TGGCAGCACC TCTTCTGGTT CTTCGGGCAC
CCCGAGGTGT ACATCATCGC GCTGCCGTTC TTCGGCATCG TCTCCGAGAT CATCCCGGTC
TTCTCCCGCA AGCCGATCTT CGGCTACAAG GGCCTGGTCG CCGCGACCGT CGCCATCGCC
GCTCTGTCGA TGAGCGTCTG GGCGCACCAC ATGTTCGCCA CCGGCCAGGT GTTGCTGCCC
TTCTTCAGCT TCCTGAGCTT CCTCATCGCC GTCCCCACCG GGATGAAGTT CTTCAACTGG
ATCGGCACCA TGTGGCGGGG GCAGATCAGC TTCGAGTCAC CGATGCTCTT CTCGGTCGGC
TTCCTGGTCA CCTTCCTCTT CGGTGGTCTC ACCGGGGTGC TGCTGGCCAG CCCGCCGCTG
GACTTCCACG TCTCGGACTC GTACTTCGTG GTGGCCCACT TCCACTACGT GCTCTTCGGC
ACGATCGTCT TCGCCGTCTT CGCCGGCATC TACTTCTGGT TCCCGAAGAT GTTCGGCCGG
ATGCTCGACG AGCGGCTCGC CCGGGTGCAC TTCTGGCTGA CCATGGTCGG CTTCCACACC
ACCTTCCTGG TGCAGCACTG GCTGGGTAAC GAGGGAATGC CCCGGCGGTA CGCCGACTAC
CAGGCCATCG ACGGCTTCAC GACGCTGAAC ATGATCTCCA CGGTCGGTGC GTTCATCACC
GGTATCTCGA CGCTGCCGTT CCTCTACAAC TGCTGGAAGT CGTACCGGAC GGGTCCGGTG
GTCGAGGTCG AGGACCCGTG GGGACACGGC AACTCACTGG AGTGGGCGAC CAGCTCGCCG
CCGCCGTTGC GGAACTTCGA CCGGATGCCA CGGATCCGTT CCGAGCGGCC CGCGTTCGAC
CACAAGTTCC CCGAGTTGGC CACCGGTCAG ACCCTGGTGG GCGCGCCGGC GGGTGGGGCC
AAGCTGTTGA CCAGCGAGGC CGACGGTGGC GCCAGCTACC AGGAGGACGT GGCGGGCGAC
CGGGACCGCC ACTGA
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| Protein sequence | MSSPGCSPRG GSRVREPWPG RVPGHPTQPG HLSGTILLAD DGRLPHSVPS GTTQNRRPLV
TTVAPKPVVT RPWPVRAPVK GSAFARLLRT TDAKQIGIMY MVTAFAFFMI GGLMALIMRA
ELARPGLQFL SPEQFNQLFT MHGTIMLLFF ATPIVFAFGN YLVPIQIGAP DVSFPRLNSF
AYWLFLFGGT LTTAGFITPG GAADFGWFAY TPLSSVEHSP GVGANMWVVG LAISGLGTIL
GSVNMITTIL TLRAPGMTMF RMPIFTWNML VTSLLALLIF PLLAAALFAL AADRILGAHV
YDPATGGPLL WQHLFWFFGH PEVYIIALPF FGIVSEIIPV FSRKPIFGYK GLVAATVAIA
ALSMSVWAHH MFATGQVLLP FFSFLSFLIA VPTGMKFFNW IGTMWRGQIS FESPMLFSVG
FLVTFLFGGL TGVLLASPPL DFHVSDSYFV VAHFHYVLFG TIVFAVFAGI YFWFPKMFGR
MLDERLARVH FWLTMVGFHT TFLVQHWLGN EGMPRRYADY QAIDGFTTLN MISTVGAFIT
GISTLPFLYN CWKSYRTGPV VEVEDPWGHG NSLEWATSSP PPLRNFDRMP RIRSERPAFD
HKFPELATGQ TLVGAPAGGA KLLTSEADGG ASYQEDVAGD RDRH
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