| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1092 |
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| Symbol | |
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| ID | 5057539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1236680 |
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| End bp | 1238476 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640473359 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | YP_001157941 |
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| Protein GI | 145593644 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.281336 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACCAGC CGACGATCGC CGACTACGGG TTCCTGTCCG ACTGCCGCTC CGGCGCGCTG
GTCGGCCGGA ACGGCTCCAT CGACTGGTGG TGCCCGGATC GGTTCGACTC TCCCGCGGTC
TTCGGGCGGC TCCTCGACCC GGAGGCCGGC CACTGGCGGC TGGCTCCGGT CGGTGCGGAC
CGTCCCGGGT GGCGGGTGGA ACGGGCGTAC CAGCCGGAGA CCCTGGTGCT GCGCACCGTC
CACCACACGC CGCAGGGGAG CGTCGCGGTC ACCGACGCGC TCGCCGCCGA ACGCGGGGCG
CGGGGGCACC AGCTTGGCCT GAACTCCCCC GCGGTGCTGC TGCGGTGTGT CGAGGGGCTC
TCCGGGCGAG TGCGGCTGGC GTCGGACTTC GTGCCCCGTC CTGACCATGG ACTGCTCACC
CCGTACCTGC ACGACCAGCC CGGTGGGACG GTGCTGGCCG TGGCCGGCGC GACGATGGTG
GAGCTCTGTT CGGACTCCCT CACCCTGCGC GCCGGGACGG ACCGGGTGCA TACCGAGTTC
GACGTCGCCG CCGGGGAGAC TGTCGGCTTC GCCGCCGGCT ACCGAGCGGC GTACGGTGCG
CCGTCGGCCC GGCTGGACCC GTCGGCCATG CTGGCCGAGA CGGTGCAGGC GTGGGAGGCG
TTCCGGGAGA CCCACCGGTA CCAGGGGTGC TATCCGGAGC TGGTGCGGCA CAGCGCAGTC
GTGCTCACCG GGCTTACCTA CGCCCGCAGC GGCGCGGTCG CCGCGGCGCT CACCACCTCC
CTGCCGGAGC AGCTCGGTGG AGACCGAAAC TACGACTACC GGTACGCCTG GTTGCGTGAC
TTCTCGATGA CGCTGCGCGC CCTCTGGGTG GCGGCCTGCC CGGCGGAGGC GTCCCGGTTG
TTTACCTGGG CGGCCCATTC GATCGGCCGG GTCGGTGCCG AGCCGGTGCC GGTGCTGTTC
GGGCTGGCGG GGGAGCGGGA CATCTCCGAG CACGTCGCGG AGCACCTACG CGGGTACGCG
GACAGCCGCC CGGTGCGGTT CGGCAACGAC GCCTGGCGGC AGCGGCAGCT GGACGTACCC
GGTGAGGTGG TGGCGGCGGT GTGGCGCCTG CACCACCTGC TCGGCGACCC CCTCGACTAC
GAGGTGCGCG AGATGGTGTG CGGGCTGACC GAGCAGGTCG CGGAGACCTG GCGGTTGCCG
GACCGGGGCA TGTGGGAAAC CCGGGACGTT GACCGGCACT ACCTGTCGTC GAAAGTGCTC
TGCTGGGTGG CGTTGGATCG GGCGGTGGCG CTGGCACCCC GGCTCGGTGA GCGCGCGGAT
CCCCGCCGTT GGGCGGCGAT CCGGGACGAG ATCCGGGACA CCGTGCTGCG GAGGGGGTGG
AGTGAGCGGG CCGGCGCGTA CACCGGGGCC TTCGGCTCCG ATGAGCTGGA CGCCTCCGTG
TTGTTCCTGC CGGTGGTGGG CTTCCTGCCA GCCACCGATC CACGGATGCG GGCCACGATC
GACGCGGTGG AGCGGGTCCT GGGTGCCGGG GGTGGGCTGA TCCGGCGGTG GGAAACCGAT
CCGGCCGGGT TCCTGCTGTG TACCTTCCTG CTGGTCGAGT GCCTGGTGCT GGCCGGGGAG
CGGGAGCGGG CCGGGGCGCT CTTCGAGCGG GCGGCCGGGT ACGCCAACGA TGTCGGGTTG
CTCAGTGAGC AGATTGACCC GCACACCGGC GCGCAGCTCG GCAACACCCC ACAGGCCCTG
TCCCACATCG GTCTGATCAA CGCCGCCTGG CGGCTGACCG ACCCGACCAC CGACTAG
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| Protein sequence | MDQPTIADYG FLSDCRSGAL VGRNGSIDWW CPDRFDSPAV FGRLLDPEAG HWRLAPVGAD
RPGWRVERAY QPETLVLRTV HHTPQGSVAV TDALAAERGA RGHQLGLNSP AVLLRCVEGL
SGRVRLASDF VPRPDHGLLT PYLHDQPGGT VLAVAGATMV ELCSDSLTLR AGTDRVHTEF
DVAAGETVGF AAGYRAAYGA PSARLDPSAM LAETVQAWEA FRETHRYQGC YPELVRHSAV
VLTGLTYARS GAVAAALTTS LPEQLGGDRN YDYRYAWLRD FSMTLRALWV AACPAEASRL
FTWAAHSIGR VGAEPVPVLF GLAGERDISE HVAEHLRGYA DSRPVRFGND AWRQRQLDVP
GEVVAAVWRL HHLLGDPLDY EVREMVCGLT EQVAETWRLP DRGMWETRDV DRHYLSSKVL
CWVALDRAVA LAPRLGERAD PRRWAAIRDE IRDTVLRRGW SERAGAYTGA FGSDELDASV
LFLPVVGFLP ATDPRMRATI DAVERVLGAG GGLIRRWETD PAGFLLCTFL LVECLVLAGE
RERAGALFER AAGYANDVGL LSEQIDPHTG AQLGNTPQAL SHIGLINAAW RLTDPTTD
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