Gene Strop_1089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1089 
Symbol 
ID5057536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand+ 
Start bp1234654 
End bp1235247 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content68% 
IMG OID640473356 
Productpentapeptide repeat-containing protein 
Protein accessionYP_001157938 
Protein GI145593641 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.820792 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGATC AGCACGATGG GTTAACCCTG CACCACGAGG ACTGGTACGG CGAGGAGATC 
GCCGACCGGC ACTACGTGGG CTGCCATTTC GAGCGGGCCG ACCTCACCGA GGCGACCACC 
CGTGGGGTGC TCTTCACCGA GTGCACGTTC GGCAACGTCA GCTTCAACGC CTCCCGACAC 
GTCAACACGG CCTTCACGCG ATGCGTCTTT CGCCGCTGCA ACTTCTTCGC CGCCGAGTTC 
ACCGGCTGCA AGCTGGTCGG CAGCACCTTC GACCAGTGTG ACCTGCGGCC GTTGACGATC 
GTCGGTGGCG ACTGGTCGTT TGTCGCGCTT CCGGGCGCGG ATCTGCGTGG TGCGCGCGTC 
GTCGACGTCC GGATGCGCGA GGCCGACCTG ATCCGGGCGG ATCTGAGCGG TGCGACGGTA 
ACCGGAGTCG ACCTGTCCGG GGCGCAGTTG CAGCACGCGA AGCTGTCCCG CGCCGACCTG 
CGCGGAAGCG ACCTCACCGA CCTTGATCCG ATCGAGGTCG AGCGGGCCGG GGCGATCGTC 
AGCGCCGAGC AGGCGGTGGT GCTGGCCCAG GCGCTCGGCT TTCAGATCGG CTGA
 
Protein sequence
MPDQHDGLTL HHEDWYGEEI ADRHYVGCHF ERADLTEATT RGVLFTECTF GNVSFNASRH 
VNTAFTRCVF RRCNFFAAEF TGCKLVGSTF DQCDLRPLTI VGGDWSFVAL PGADLRGARV 
VDVRMREADL IRADLSGATV TGVDLSGAQL QHAKLSRADL RGSDLTDLDP IEVERAGAIV 
SAEQAVVLAQ ALGFQIG