| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1088 |
|---|
| Symbol | |
|---|
| ID | 5057535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 1233804 |
|---|
| End bp | 1234445 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640473355 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001157937 |
|---|
| Protein GI | 145593640 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2910] Putative NADH-flavin reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.775201 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGCACCA TCGTCGTCTT CGGGGCGGGC GGAACCGCGG GCTCCCAGAT CACCCAGGAG
GCGTTCCACC GCGGGCATCG GGTCACCGCT GCGGTACGCC GGCCAGAGGC CACCTCGTAC
CTGCCGGCAG GGGTACGGGT GGTGACCGGC GACGCGACCA GCGAGCGCAG CGTACGGGAG
CTGGCCCCGG AGGCCGACGC GCTGGTGGTG GCGATCGGTG GTGGGGAACG CGGCCTCTGG
CTCGACGCGG CGCGGACGCT GGTCGGTACG CTACGCGGGA CACCGAATCC GCCCCGGATC
ATCCACCTCG GTGGTGGAGC CACGCTGTGC ACCCCGCAGG GCGGCCGGTT CCTGGACGAG
CCCGACTTTC CCCAGGAGTA CCGGGACGCG GCGCTGGGCC AGGCCGACGC CCTGACGTAC
TACCGGTCCG CGGCCGGCGG GGTGTGCTGG ACGTACGTGT CACCACCGCC CCTGGAGTTC
CACCCCGGCG CCCGCACCGG GCACTACCGC ACCGGCGGGG ACCACCCGGT AACCGATCAC
GAGGGCCGGT CGGTCCTCAC CTACCAGGAC ATGGCCGTCG CGATCGTTGA CGAAATCGAG
AACCCACGGC ACGAGAACAC CCGTTTCACC GTCGCCTACT GA
|
|---|
| Protein sequence | MGTIVVFGAG GTAGSQITQE AFHRGHRVTA AVRRPEATSY LPAGVRVVTG DATSERSVRE
LAPEADALVV AIGGGERGLW LDAARTLVGT LRGTPNPPRI IHLGGGATLC TPQGGRFLDE
PDFPQEYRDA ALGQADALTY YRSAAGGVCW TYVSPPPLEF HPGARTGHYR TGGDHPVTDH
EGRSVLTYQD MAVAIVDEIE NPRHENTRFT VAY
|
|---|
| |