| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1086 |
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| Symbol | |
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| ID | 5057533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1231425 |
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| End bp | 1233020 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640473353 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001157935 |
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| Protein GI | 145593638 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.970713 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.875398 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACACAAC AATCGGTCGC GTCCCCTCAA CCGGGCGCGA CACCGGACAA GCTCGACGCC
GCGGTGCTCA AGGTGGCGGG CGTCGTCGTG CTCGGCGCGA TCATGTCGAT CCTCGACGTG
ACGGTGGTCA GCGTCGCGCT ACCGACCTTC CAGAATGAGT TCGACGCGTC CTATGCCCGG
GTCGCGTGGA CAATGACCGG CTACACCCTC GCCCTGGCCA CGGTGATCCC CCTGAGCGGG
TGGGCGGCCG ACCGCTTCGG CACCAAACGC CTGTACATGA TCGCCCTGGC CCTGTTCACC
ATCGGTTCTG GTCTCTGTGC CACCGCTGAC TCGATCGGTG AGTTGATCGC GTACCGGGTG
CTGCAGGGCC TCGGTGGCGG CATGCTGATG CCGATCGGCA TGACAATCAT GACCCGGGCG
GCGGGGCCGC ACCGGATCGG CCGGTTGATG GCAGTCCTGG GCATCCCGAT GCTGCTCGGT
CCGATCGGTG GTCCGATCCT CGGCGGCTGG CTGATCGACG TGGCGAGCTG GCACTGGATC
TTCCTGATCA ACCTGCCGAT CGGGCTGCTC GCCCTGGTCT ACGCGCAGCT GGCCCTGCCG
AAGGACGCTC CGGAGCCGTC CGAGTCGTTC GACGTCCTCG GCATGCTGAT GCTCTCCCCG
GGACTGGCGC TGTTCCTCTA CGGCGTCTCC ACGCTGCCCG AGGCGGGCAC CTTCACCGAC
CCCGAGGTGT GGGTGCCGAT GCTGCTCGGC GTCGCGCTGG TGGTCTCCTT CGTCCGCTAC
TCGTTCAAGC CCCAGCATCC GCTCCTCGAC CTGCGGCTGT TCCGCAACCG CAGGCTGACC
ATCGCGTCGG TGACGCTGTT CGTGTTCATT GTCGCGTTCA TGGGCGCCGG CCTGCTCTTC
CCGAGCTACT TCCTGCAGGT TCGCGGGGAG TCGACCCTGC ACGCCGGCCT CCTCATCGCG
CCGCAGGGCA TTGGTGCGAT GGTGACGATG CCGATCGCCG GGACGCTGGC TGACCGGGTG
CCGGTGGGAC GAACGGTGCC GTTCGCGTTG GTGCTGATCG CCGCTGGGTT CTTTACCTTC
ACACAGGTCG GCCCAGACAC CTCATATCTG TTGATCTGTG GCTCGTTGTT CGTCATGGGT
CTGGGTATGG GGGGCACGAT GATGCCGATC ATGACCTCGG CGTTGCGGAC GCTGACCGGG
CCGGAGGTAG CCCGTGGCTC CACCCTGATG AACATCATCC AGCAGATCGG TGGTTCGGTC
GGCGCGGCGG TGATGTCGGT GATCCTTACC AACGAGCTGA ACGGATCCCG GCCGATCCCC
GGCCTGACCG GTTCGAACGG TGAGCCGGTC ACCGAGGCGG GCCTGGCGAT CGCCGCCCAG
CGGCAGCCAG AACTGGCCCA ACAGGTCCCC GACCCGACGC TCATCGAGCG CGGGCTCGCC
TTCGCCGCCG ATTCCTTCGC CGCCACGTTC TGGGTGGCCT TCGCGCTGGT GCTGCTCACC
TTCGTCCCGG TTGCGTTCCT ACCCCGGCGG TGGGAACGGT CGCAGTCGCG CGACGACCAG
CCGGGTGAAC CGAGTACGCC GGTGGTGGTC CACTGA
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| Protein sequence | MTQQSVASPQ PGATPDKLDA AVLKVAGVVV LGAIMSILDV TVVSVALPTF QNEFDASYAR
VAWTMTGYTL ALATVIPLSG WAADRFGTKR LYMIALALFT IGSGLCATAD SIGELIAYRV
LQGLGGGMLM PIGMTIMTRA AGPHRIGRLM AVLGIPMLLG PIGGPILGGW LIDVASWHWI
FLINLPIGLL ALVYAQLALP KDAPEPSESF DVLGMLMLSP GLALFLYGVS TLPEAGTFTD
PEVWVPMLLG VALVVSFVRY SFKPQHPLLD LRLFRNRRLT IASVTLFVFI VAFMGAGLLF
PSYFLQVRGE STLHAGLLIA PQGIGAMVTM PIAGTLADRV PVGRTVPFAL VLIAAGFFTF
TQVGPDTSYL LICGSLFVMG LGMGGTMMPI MTSALRTLTG PEVARGSTLM NIIQQIGGSV
GAAVMSVILT NELNGSRPIP GLTGSNGEPV TEAGLAIAAQ RQPELAQQVP DPTLIERGLA
FAADSFAATF WVAFALVLLT FVPVAFLPRR WERSQSRDDQ PGEPSTPVVV H
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