| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1082 |
|---|
| Symbol | |
|---|
| ID | 5057529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 1228506 |
|---|
| End bp | 1229510 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 640473349 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001157931 |
|---|
| Protein GI | 145593634 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.330603 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.587362 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCCTCC GTCCCGGTGA GGTGGTCCAC CGTGTGTTCC CGGTCGTGGA GCTGGTCGAG
GCCGTTTCCG GGAACATTGG CCGACTACCC GTGCCCGGGC TGGCGGTGGA CCTGGCCGGC
ATCGACGAGC CGCCGCGTCC GCTGCCGCCG GGGATCCGGG CGGTGGAGGT CGGCAGCGGC
GTGGTGACCG ACCGGCGCGT GGTCTTCCTC GGCCGGCACC GGCAACGGGA CTGGTGGTTT
GAGGAGCTGA TCGCGCCGGC CCACCATCGC CGTTCGCCGT TGACCCTGTT GCCCACCGTC
GACGGGTCCC TGGTGGCCGG GCTGCTGGTG TCGCGTCCGG TGACCCTGAC CTTCCGGTTC
CACCTCACCC TCGCCTTCGC CGACGGCCTT GGCAACCGGG ATGCGGTCGC CGCCTGCCTG
GATGAGCTGG TCGCCACCCA CCAGCGCACC CGGCCGACGG CGCCCCCAGT CGCCCGACCG
GAGCAGGCCC CGGTGCGGGC CCGGCTGAGC GACCGCCGGG GCGTCAGCGC CGTTGCGGCC
GTCGCCGCCT CGGTGGTCAC TGCCCTCGCT GTCGCCGTTG GGGTGGCCCT GCCGCCAGCC
GCGCCGATGG TGGGGCTCGA CCGGTCCGAG CCCAGCGACG TGCCCAGCCC GCCGGGCCCA
TCCAGCTCTG GACCGGGTAG CCGTCCGGTG CCCCCCGCGT CGCCACAGCC CGATCCGACC
ACCGTGGTGC CGCCGCCGGC CGTGGTGGTA CCAACTGTCG TCGAGGGGTC GACCGTGCCA
TCCCCTGTTG ATCCACCGAT ACCGCACCGT GCCGAACCGC CGAACCGCTC CCGCGACGGG
CGGGAACCCA GCCGAAGGCA CCACGGCCCG AAACGCTCGA GTGACCGGTC GCCGTCGGCC
GGTCAGGACG GGCGTTCGCC CCGGTGGGCG AAGGACCGTG ACCGCGCCGC CGCGACGGGA
GATCGGGGCA ACCGGGGCCG GGACCGGGCG GCGAATCTGT CGTAG
|
|---|
| Protein sequence | MRLRPGEVVH RVFPVVELVE AVSGNIGRLP VPGLAVDLAG IDEPPRPLPP GIRAVEVGSG
VVTDRRVVFL GRHRQRDWWF EELIAPAHHR RSPLTLLPTV DGSLVAGLLV SRPVTLTFRF
HLTLAFADGL GNRDAVAACL DELVATHQRT RPTAPPVARP EQAPVRARLS DRRGVSAVAA
VAASVVTALA VAVGVALPPA APMVGLDRSE PSDVPSPPGP SSSGPGSRPV PPASPQPDPT
TVVPPPAVVV PTVVEGSTVP SPVDPPIPHR AEPPNRSRDG REPSRRHHGP KRSSDRSPSA
GQDGRSPRWA KDRDRAAATG DRGNRGRDRA ANLS
|
|---|
| |