Gene Strop_1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1080 
Symbol 
ID5057527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1226536 
End bp1226862 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content65% 
IMG OID640473347 
Productantibiotic biosynthesis monooxygenase 
Protein accessionYP_001157929 
Protein GI145593632 
COG category[S] Function unknown 
COG ID[COG1359] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.707346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.216609 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGATTCG CCAGTGGATC ACGAGTGTGG GAGGTCCGGC AGGTGCTCAT CGTCGCCGGA 
AGCATGTACG TCGACCCGGA GGATCGAGAC AACTACCTCG CCGGTTGCCT CGAGGTGGTG
ACCGCCGCGC GAGACGCGTC CGGCTGTCTC GACTTCACGA TCAGTGGGGA CCTGGTCGAG
CCCGGCCGGA TCAACGTCTA CGAGCGTTGG GAGACCGAGG AGCAGCTGCT GACCTTTCGC
GGTGCCGGCC CGACCGAGGA GCAGCAGGTG GCGATCCGGG ACGCGAAGAT CTATCGATAT
GAGATCTCCG GCGTAGAGAC ACCCTGA
 
Protein sequence
MRFASGSRVW EVRQVLIVAG SMYVDPEDRD NYLAGCLEVV TAARDASGCL DFTISGDLVE 
PGRINVYERW ETEEQLLTFR GAGPTEEQQV AIRDAKIYRY EISGVETP