| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1077 |
|---|
| Symbol | |
|---|
| ID | 5057524 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 1222788 |
|---|
| End bp | 1224131 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640473344 |
|---|
| Product | cyclopropane-fatty-acyl-phospholipid synthase |
|---|
| Protein accession | YP_001157926 |
|---|
| Protein GI | 145593629 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2230] Cyclopropane fatty acid synthase and related methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0955445 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCTGA TCGATCGACA CCAGCGGGAA GCGAGCGTCC CCGCGGCACC GTCGCGGGTG
GCCCGAGGTC GGGGCCGGAC CCTGGCCGAT GTCATTCGGG CGCTGACCAC CGAACCCCTG
CCGGTACGGA TCACCGGGTA CGACGGCAGC TCGGTCGGCC CGGCTGACGC CGGCATCACC
CTCGCCATCC GATCCCCGCG CGGCCTGTCC TATCTGCTGA CCGCCCCGGG TGACCTGGGG
ATGGCCCGGG CATATGTCAG CGGCGACCTC GGCCTGTCGG GGGTGCACCC GGGTGACCCG
TACGAGGCGC TGCGGGTCCT CAAGGACGAG CTGCGGTTGC GGGTTCCGCC GGTGCCCGAG
GCCCTGGCCC TGGCCCGGGG CCTGGGCTGG GAGCGGCTGC TACCGCCGCC ACCTCCGCCC
CAGGAGGCGG TGCCCCGGTG GAAGCGGGTG ATGGGCGGGC TGCGTCACTC CCGCATCCGG
GACAGTAGTG CCATCTCGCA CCACTACGAC GTGTCGAATG CCTTCTACGA GAAGGTGCTC
GGGGAGTCGA TGACGTACAC CTGCGCATTG TTCCGCTCGC CGCAGGACTC GTTGGAGACG
GCGCAGGCGG CCAAGTACGA CCTGGTGGCG CAGAAGCTCG CGGTCAAGGC CGGGGTGCGG
CTGCTGGATG TGGGCTGCGG GTGGGGCGGC ATGGTCCGGC ACGTGGCCCG GGAGTACGGC
GTCCAGGCGC TCGGGGTGAC CCTGTCCAGA GCACAGGCCG AGTGGGCGCA GGCCGCGATC
GAGCGGGAGG GGCTGACCGG GCTGGCCGAG GTGCGGTACC TCGACTACCG GGACACGCCG
CGGGAGCAGT TCGACGTGGT GTCCTCGATC GGACTGACCG AACATATCGG GGTACGTCAC
TATCCGGCGT ACTTCGGCTC GCTCCGGGAC CGGCTGCGGC CCGACGGCCG GCTGCTCAAC
CACTGCATCA CCCGTGCCGA CAACCGTGCG CCGCACCGCT CCGGGGCGTT CATCGACCGG
TACGTCTTTC CGGACGGTGA GCTGGCCGGG CCGGGCCGGG TGCTCTCCGA GATCCATGAC
GTGGGCTTGG AGGTGCAGCA CGAGGAGAAC CTGCGCCGCC ACTACGCGTT GACGCTTGCG
GCCTGGTGCC GCAACCTCGT GGCGAACTGG GACTTCTGCG TCGGCGAGGT GGGTGCGGGA
ACCGCCCGGG TCTGGGGCCT GTACATGGCC GGATCCCGGA TGTCGTTCGA GCGCAACGCC
ATCCAGCTAC ACCAGGTGTT GGCGACGCGG ACCAGCGCCG CGGGGGTGAC GAGCTACCCA
CTGCGGCCGG ACTGGCTGCC CTGA
|
|---|
| Protein sequence | MSLIDRHQRE ASVPAAPSRV ARGRGRTLAD VIRALTTEPL PVRITGYDGS SVGPADAGIT
LAIRSPRGLS YLLTAPGDLG MARAYVSGDL GLSGVHPGDP YEALRVLKDE LRLRVPPVPE
ALALARGLGW ERLLPPPPPP QEAVPRWKRV MGGLRHSRIR DSSAISHHYD VSNAFYEKVL
GESMTYTCAL FRSPQDSLET AQAAKYDLVA QKLAVKAGVR LLDVGCGWGG MVRHVAREYG
VQALGVTLSR AQAEWAQAAI EREGLTGLAE VRYLDYRDTP REQFDVVSSI GLTEHIGVRH
YPAYFGSLRD RLRPDGRLLN HCITRADNRA PHRSGAFIDR YVFPDGELAG PGRVLSEIHD
VGLEVQHEEN LRRHYALTLA AWCRNLVANW DFCVGEVGAG TARVWGLYMA GSRMSFERNA
IQLHQVLATR TSAAGVTSYP LRPDWLP
|
|---|
| |