| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1067 |
|---|
| Symbol | |
|---|
| ID | 5057514 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 1213895 |
|---|
| End bp | 1214857 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640473334 |
|---|
| Product | helix-turn-helix, type 11 domain-containing protein |
|---|
| Protein accession | YP_001157916 |
|---|
| Protein GI | 145593619 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2378] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTGGAGA CCTCTGCCCG CCTGCTTGAA CTGCTGTCAT TGCTCCAGCT CAAGCGCGAC
TGGACGAGCG CCGAACTCGC CGGCCGGCTT GAGGTGAGCA CGAGGACGGT GCGTGCCGAC
ATCGCCAGGC TGCGGTCGCT CGGCTATCCC GTGCACGCGC GTCCGGGCGT CGCGGGCGGC
TACCGGTTGG TCGCCGGGAC GGCGATGCCC CCATTGCTGC TTGACGACGA GGAGGCGGTC
GCGGTCGCGG TCGGGCTGGG TGCGGTCGCG ACCCAGCGGC TCGGTGTCGA AGAGACATCG
CTTACCGCGC TCGCGAAGCT GGAGCAGGTG CTGCCCGCGC GCCTGCGTCG GCGCGTCGAG
GCGGTACGGG AGGCGACGAG CGTTGTTCCA GGGGTGCGAC CGCCGCTTGA TCTGTCGGCT
CTCGGCGCGG TCGCCGCCGC GATCCGCGGC CACGAGCGGT TGCGGTTCGG CTACACCAAG
CCCGGGGGCG GCGAGGGGGT CCGTCATACC GAACCGCAAC GACTGGTGAG CTGGGGATCG
CTCTGGTACC TGCTTGCGTG GGATCTCGAC CGGGATGACT GGCGGGTCTT CCGGGTCGAC
CGCATGGTGG TGTACGCACC GACGGGTGTG CGGTTTCAGC CGCGGTTGAT CCCGGCGGAC
AACGTCGTCG AGTACGTTGT CGGACGCGTC AGCAAGGCGG CCTGGACCTA CCGTGCCCGG
GTACTCGTAC ATGCTCCCGC CGCCACCGTC GCCGCGAAGA TCCGCATCCC GGTCGACATC
GAGGTGGTCG ACGAGTTCAC CTGCCAGGTC GTGCTGGGCT CCGACCACCC CGACCGGCTT
GCGCTGTGGA TGACACAGCT CGACCTCGAC ATCGAGGTGA TCGACGGAGA CGAACTCGCG
GTGGCGCTCG AGCGCCTCGC GGCGAGGCTC CACCGCGCGG CGGGTGGCGC ATCCACGACG
TGA
|
|---|
| Protein sequence | MLETSARLLE LLSLLQLKRD WTSAELAGRL EVSTRTVRAD IARLRSLGYP VHARPGVAGG
YRLVAGTAMP PLLLDDEEAV AVAVGLGAVA TQRLGVEETS LTALAKLEQV LPARLRRRVE
AVREATSVVP GVRPPLDLSA LGAVAAAIRG HERLRFGYTK PGGGEGVRHT EPQRLVSWGS
LWYLLAWDLD RDDWRVFRVD RMVVYAPTGV RFQPRLIPAD NVVEYVVGRV SKAAWTYRAR
VLVHAPAATV AAKIRIPVDI EVVDEFTCQV VLGSDHPDRL ALWMTQLDLD IEVIDGDELA
VALERLAARL HRAAGGASTT
|
|---|
| |