Gene Strop_1065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1065 
Symbol 
ID5057512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1211601 
End bp1212428 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content63% 
IMG OID640473332 
Productalpha/beta hydrolase fold 
Protein accessionYP_001157914 
Protein GI145593617 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.289777 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTAA CGGACGTGTT CGAGTGGCGC GGACGCAAAG TTCGATGGCG TCAAATGGGT 
TCTGGGCCTG ACGTCGTGTT CTGTCATGGG ACCCCGTGGT CCTCGCAGCT GTGGGGCCCC
TACGCTGAGG CCCTGAGCAG TGAGTTCACG GTTTACCTTT GGGATATGCC CGGCTACGGG
CAGTCATCGA AGTTCCCCGA TCACCAAGTG TCGTTGGATC TCCAAAGTGA GTTGCTGACT
GACCTCGTCT CGCATTGGGA GCTCCAGTCC CCACATGTCG TAGCTCACGA CTACGGCGGC
GCCGTCGCGT TGAGGGCCCT CCTTTTGCAT GGGTGCGCGT TCGCGTCGTT GGCGCTGGTC
GACGTGGTGG CGCTGGCTCC CTGGGGGTCG GACTTCTTCC GGCTGGTGGG CGACAACACC
GAGGCTTTCC ACGCGCTTCC AAGCGCCGTA CACGAAGGAG CGCTGCGGGC CTACATCGCA
GGAGCCAGTC ACGTCGGTTT GACGCCCGGG CAGATGCAGG ACCTTGCTTC TCCCTGGCTC
GATACCGACG GGCAAGCCGC GTTCTACCGA CAGATCGCCC AGGCGGACCA GGCCTACACA
GACGAGGTTC AAGGGCTCTA TCCGCGTCTC GACCTGCCGG TCCTGGTGGT GTGGGGCAAG
AACGACACGT GGATCCCGGT CGACCGCGCT CACCGACTTG CCGAACTCAT CCCCGGCGCC
CAACTCGAGT TAGTCGATGG GGCTGGTCAC CTGATTCAGC TTGACCAGCC CGTACAGCTG
GCCACGACGT TGCATCGTTG GCTCACCTCG CAGGCCACGA TGAGGTGA
 
Protein sequence
MDLTDVFEWR GRKVRWRQMG SGPDVVFCHG TPWSSQLWGP YAEALSSEFT VYLWDMPGYG 
QSSKFPDHQV SLDLQSELLT DLVSHWELQS PHVVAHDYGG AVALRALLLH GCAFASLALV
DVVALAPWGS DFFRLVGDNT EAFHALPSAV HEGALRAYIA GASHVGLTPG QMQDLASPWL
DTDGQAAFYR QIAQADQAYT DEVQGLYPRL DLPVLVVWGK NDTWIPVDRA HRLAELIPGA
QLELVDGAGH LIQLDQPVQL ATTLHRWLTS QATMR