Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1065 |
Symbol | |
ID | 5057512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 1211601 |
End bp | 1212428 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640473332 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001157914 |
Protein GI | 145593617 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.289777 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATCTAA CGGACGTGTT CGAGTGGCGC GGACGCAAAG TTCGATGGCG TCAAATGGGT TCTGGGCCTG ACGTCGTGTT CTGTCATGGG ACCCCGTGGT CCTCGCAGCT GTGGGGCCCC TACGCTGAGG CCCTGAGCAG TGAGTTCACG GTTTACCTTT GGGATATGCC CGGCTACGGG CAGTCATCGA AGTTCCCCGA TCACCAAGTG TCGTTGGATC TCCAAAGTGA GTTGCTGACT GACCTCGTCT CGCATTGGGA GCTCCAGTCC CCACATGTCG TAGCTCACGA CTACGGCGGC GCCGTCGCGT TGAGGGCCCT CCTTTTGCAT GGGTGCGCGT TCGCGTCGTT GGCGCTGGTC GACGTGGTGG CGCTGGCTCC CTGGGGGTCG GACTTCTTCC GGCTGGTGGG CGACAACACC GAGGCTTTCC ACGCGCTTCC AAGCGCCGTA CACGAAGGAG CGCTGCGGGC CTACATCGCA GGAGCCAGTC ACGTCGGTTT GACGCCCGGG CAGATGCAGG ACCTTGCTTC TCCCTGGCTC GATACCGACG GGCAAGCCGC GTTCTACCGA CAGATCGCCC AGGCGGACCA GGCCTACACA GACGAGGTTC AAGGGCTCTA TCCGCGTCTC GACCTGCCGG TCCTGGTGGT GTGGGGCAAG AACGACACGT GGATCCCGGT CGACCGCGCT CACCGACTTG CCGAACTCAT CCCCGGCGCC CAACTCGAGT TAGTCGATGG GGCTGGTCAC CTGATTCAGC TTGACCAGCC CGTACAGCTG GCCACGACGT TGCATCGTTG GCTCACCTCG CAGGCCACGA TGAGGTGA
|
Protein sequence | MDLTDVFEWR GRKVRWRQMG SGPDVVFCHG TPWSSQLWGP YAEALSSEFT VYLWDMPGYG QSSKFPDHQV SLDLQSELLT DLVSHWELQS PHVVAHDYGG AVALRALLLH GCAFASLALV DVVALAPWGS DFFRLVGDNT EAFHALPSAV HEGALRAYIA GASHVGLTPG QMQDLASPWL DTDGQAAFYR QIAQADQAYT DEVQGLYPRL DLPVLVVWGK NDTWIPVDRA HRLAELIPGA QLELVDGAGH LIQLDQPVQL ATTLHRWLTS QATMR
|
| |