| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1041 |
|---|
| Symbol | |
|---|
| ID | 5057487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 1180357 |
|---|
| End bp | 1181346 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640473310 |
|---|
| Product | ornithine cyclodeaminase |
|---|
| Protein accession | YP_001157893 |
|---|
| Protein GI | 145593596 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.726287 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCTGT TGAGCGGTAA GCAAGTGCTG GAGCTGTATT CGCCGGCCGA CGCGTACCAG
GTCATCGCGG ACGTCATGCG TCGTTACAGC GGCGGCGGCG TCGTGCAGCC GGTGCGTACG
GTGCTCAGCT CCGACCGTGA CGCGTCACTC TTCGCGTCCA TGCCCTGTCA TGTTTCCGGC
GAGGTCGACT CGGGTTTCGG ACTCAAGGCC GTACTTCACG TGCCCGGCAA CGCCGAGCGC
GGCCTCGTGT CGCATGTGGG TGCCATCCTC GTCTTCCACC CTGACACCGG GCAACCGCTG
GCCGTCATCG ACGCCGCAGC GGTCACGAGT CTGCGTACGG CCGCAGCTTC GGCCGTAGCA
ACCGACGCAT TGGCCCGCGC GGATGCCGGG GACCTAGCCC TGCTGGGCGC CGGAGTGCAG
GCCCGCAGTC ACCTGGTGGC CATGAACCGG ATCCGGACCC TGCGCCGGGT TCGCGTGTGG
AACCGCACTC CCGCCCACGC CGAGCAGTTT CGGGCCTGGG CCCGCTCCCT GGTAGAGGTC
GACGTCGAGC TGATGCCGAC GCCGGCCGCT GCGCTGCGCG GCGCCGACGT GGTATGCACC
ACGCTGGGCA GCAGCGATCC GGTGGTCTCC GCAGCCGACA TCGCCCCAGG TTGCCACGTT
AACGCGGTCG GGGCATCGGT GCCCAGCAAG CGGGAGCTCG ACTCGGAGGC GGTCGCGTCG
TGTTCTGTCT TCGTCGACAG CCGCGAGGCG GCCATGCGCG AGTCCTCCGA GATCACCATG
CCGCTCGCGG AGCGACTCAT CCCAGGTGAC TGGTACTTCC CCGAGATCGG CGAGGTACTC
CTCGGCCGGC ACCCGGGCCG CACAGACCGC GACGAACGAA CCCTCTACAA GTCGCTGGGC
ATGGCGGCGC AGGATGTCGC GTCGGGCTTT GCCATCGTAC GAGCTGCCCA GCGACTCGGC
GTCGGCACGG TGACCGACAT CTTCAGCTGA
|
|---|
| Protein sequence | MLLLSGKQVL ELYSPADAYQ VIADVMRRYS GGGVVQPVRT VLSSDRDASL FASMPCHVSG
EVDSGFGLKA VLHVPGNAER GLVSHVGAIL VFHPDTGQPL AVIDAAAVTS LRTAAASAVA
TDALARADAG DLALLGAGVQ ARSHLVAMNR IRTLRRVRVW NRTPAHAEQF RAWARSLVEV
DVELMPTPAA ALRGADVVCT TLGSSDPVVS AADIAPGCHV NAVGASVPSK RELDSEAVAS
CSVFVDSREA AMRESSEITM PLAERLIPGD WYFPEIGEVL LGRHPGRTDR DERTLYKSLG
MAAQDVASGF AIVRAAQRLG VGTVTDIFS
|
|---|
| |