| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1039 |
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| Symbol | |
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| ID | 5057485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1178731 |
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| End bp | 1179693 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640473308 |
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| Product | branched-chain amino acid aminotransferase |
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| Protein accession | YP_001157891 |
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| Protein GI | 145593594 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01122] branched-chain amino acid aminotransferase, group I |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGGGCT TGGACCGGGC AGCGTCGCCC GGACTGCGGC TCGGACGCTG GGCCTACCAC
CGCGGCGAGT TCGTGCCGGC GTCTGATCCG CAGTTGCCGC TCAGCACGCA GGCTTTGCAC
TATGGGATCG GTGTATTCGA GGGGATTCGG GCGTACCGCA GCGCTGACGG CCTGTTTCTG
TTCCGTGCGT ACGACCACTA CGAGCGCATG CTGCGTGGCT GCCGAACGCT GAGGATTCCG
CTGCCGGGGA AGCCCGGCGA TCTGGTCGAC ATCACCGTCG AGCTGCTGCG GCGCAATGCT
CACGATGAAG ACGTGTACGT GCGGCCGGTG GCCTACAAGC TCTCGTTGCT GCCCGGCATG
CCACCTGGCG TATTCCTGAG CGGGCTGTCG GACGCCATGT CGATCATCAG CTACAGCCTG
CCGGTTGAGC GGCTCGGCCA GGGCGTGCGG TGTGGCATCA GCTCCTGGCG GCGCCCGCCA
CGCGACACAC TGCCCGCCCA GGCGAAGATC ACCGGAGGCT ATGTGACGAG CGCTTTCGCT
ACCGACGAGG CACGAGCAGG CGGGCAGGAC GACGCCATCC TGCTTGACCG CTCGGGCAAC
GTGGCCGAGG CGACAACCGC CAACGTCTTC ACGGTCCGCG ACGGTTGCCT GGTCACCCCC
CCGACAACCG GAGACCTGCT GCCCGGCATT ACCAGGGACA CGCTCCTCAC GCTCATCCGC
GAGGTGGGCC TGCCCGTCGC TGAGCGGTCG GTCAGCCCCG CCGAGCTGTT CTCCGCAGAC
GAGGTTTTCC TCTGTTCCAC CGGCAAAGGT GTGGTGCCGG TCATCGCCGT GGCAGGCCGT
GACGTCGGCA CCGGTGCGAT CGGCCCAGTT ACCGCCAAGG TCCGTGCGCT CTACGCGGCC
GCGACGACCA TGCCGGGCGG TATTCACGCG GACTGGCTTA CTCCCGTCAT GGAGACACCG
TGA
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| Protein sequence | MAGLDRAASP GLRLGRWAYH RGEFVPASDP QLPLSTQALH YGIGVFEGIR AYRSADGLFL
FRAYDHYERM LRGCRTLRIP LPGKPGDLVD ITVELLRRNA HDEDVYVRPV AYKLSLLPGM
PPGVFLSGLS DAMSIISYSL PVERLGQGVR CGISSWRRPP RDTLPAQAKI TGGYVTSAFA
TDEARAGGQD DAILLDRSGN VAEATTANVF TVRDGCLVTP PTTGDLLPGI TRDTLLTLIR
EVGLPVAERS VSPAELFSAD EVFLCSTGKG VVPVIAVAGR DVGTGAIGPV TAKVRALYAA
ATTMPGGIHA DWLTPVMETP
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