| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1036 |
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| Symbol | |
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| ID | 5057482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 1175301 |
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| End bp | 1176692 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640473305 |
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| Product | 3-deoxy-7-phosphoheptulonate synthase |
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| Protein accession | YP_001157888 |
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| Protein GI | 145593591 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3200] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR01358] 3-deoxy-7-phosphoheptulonate synthase, class II |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.479807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.750222 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTATGGAA CGCGCATGCG ACCCGGCGTG GAGCGGTCGA TCCGCCATTC GCCACCAGCG
ACGAACGATG GCGACAGAGA ACTCTGCCTA GACCGGTGGC GCGAGCTACC CCGGCGGCAG
GTGCCACCCT GGCCCGATCC CGCCGAGGTG GCAGCAGTGT GCGCGACACT CGGCAAAATG
CCGCCGATCG TCACACCCTA CGAGGTCGAT GAACTGCGTC ACCGCCTGGC CGAGGTATGC
GAAGGACGCG CCTTCCTGTT ACAGGGCGGC GACTGCGCCG AGACGTTCAC CGGAAACACT
GAGAGCCACC TGCTGGGCAC CACGCGGACG CTGCTGCAGA TGGCGATGGC GATAACGTAC
GGCGGTTCCG TTCCGGTGGT GAAGGTGGCG CGCCTCGCCG GCCAGTACGG GAAGCCCCGA
TCCTCGGCGA CCGATTCCCT GGGGTTGCCC GCGTACCGTG GCGATATTAT CAATGCGCGG
CACCCGGCCG AGTCGGCGCG GGCCGCCGAT CCGCAGCGCA TGATCGATGC GTACGCGAAT
TCCGCGGTCG CGATGAACCT CATCCGCGCC TATCCGCCGG ACGATCTGAC CGACCTCGAA
GAGCTGTACG ACGATACCTA CGACCTCATC CGCGCTTCCC CGGCCGGAGC CCGGTACCAG
GTCATCTCCG GCGAGATCGA CCGGGCGCGC GGCTTCGTCC GCGCGTGGGG GCCGAGCGAG
CGCCACGCGT TGCGGGAATC AAAGGTGTAC TGCTCGCACG AGGCGCTGGT GCTCGAGTAC
GACCGGGCGC TGACCCGAAT CAACGACGGC CGGGCATACG CGTTGTCGGG TCACTTTCTG
TGGGTCGGCG AACGCACCCG CCAGCTTGAC CACGCGCACG TCGACTTTGT CGCGCGTATC
GCCAACCCAA TCGGCGTGAA GCTCGGCCCG GCCGCCAGCC CGCATGCTGC GATCGAGCTG
TGCGAGCGGC TCAACCCCGA GAACCTGCCC GGGCGGCTCA CCCTGATCAG CCGCATGGGC
AACCGCCAGG TACGTGACGT GTTTCCGGCG ATCGTCGACA AGGTCACGGC CGCGGGCGCC
AAGGTCGTTT GGCAGTGCGA TCCGATGCAC GGCAACACCG AGCAGTCCTC ACACGGCTTC
AAGACCCGGC GCCTCGACCG GGTCGTTGAC GAGTTGCTGG GCTACTTCGA CGTGCACCGC
AGTCTGGGCA CCCATCCGGG AGGCGTCCAC GTCGAGCTCA CCGGTGAGAA CGTCACCGAG
TGCCTCGACG GGATACGTGG CGTCGAGGAC CAACACCTAC CGGATCGCTA CGAGACTGCC
TGCGACCCGC GGCTGAACAT GCGGCAGAGC TTAGAACTCG CGTTGCTGGT CGCCGAGATT
CTACGCGGCT GA
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| Protein sequence | MYGTRMRPGV ERSIRHSPPA TNDGDRELCL DRWRELPRRQ VPPWPDPAEV AAVCATLGKM
PPIVTPYEVD ELRHRLAEVC EGRAFLLQGG DCAETFTGNT ESHLLGTTRT LLQMAMAITY
GGSVPVVKVA RLAGQYGKPR SSATDSLGLP AYRGDIINAR HPAESARAAD PQRMIDAYAN
SAVAMNLIRA YPPDDLTDLE ELYDDTYDLI RASPAGARYQ VISGEIDRAR GFVRAWGPSE
RHALRESKVY CSHEALVLEY DRALTRINDG RAYALSGHFL WVGERTRQLD HAHVDFVARI
ANPIGVKLGP AASPHAAIEL CERLNPENLP GRLTLISRMG NRQVRDVFPA IVDKVTAAGA
KVVWQCDPMH GNTEQSSHGF KTRRLDRVVD ELLGYFDVHR SLGTHPGGVH VELTGENVTE
CLDGIRGVED QHLPDRYETA CDPRLNMRQS LELALLVAEI LRG
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