Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1029 |
Symbol | |
ID | 5057475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 1165480 |
End bp | 1166313 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640473298 |
Product | cyclase family protein |
Protein accession | YP_001157881 |
Protein GI | 145593584 |
COG category | [R] General function prediction only |
COG ID | [COG1878] Predicted metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.121896 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGGACG GCAGCGCCGT ACACGGCCAA TCGGCGGTCC CCGCCGGCTA CCAGGTGGTT GACCTTTCGG TGACCATCGC CGAGGACTTG CCATGCTACT GGGAGGGGCA TCAACCCTTC CAGCACAAGA CCTGGAACTG GTTTGCCGAC CATCGCAACG CGATGGCCTC CGTCTACAGC CGCGGCGGCC CGTACGCGAC CCGTTGGATG GCCATCGACG AGCACACCGG AACCCACTTT GATGCTCCTC TGCACTTCAT CCCACCTCCG GACTCCGGCC TGCCGGGAGC GGGTCCGGCG GGTGCCATCT CGGCTGACCA GGTCGGGCTG GCGAGCCTCA TGGGAGCCGC CGCGGTAATT GACGTGGCAT CTCCCGGTGG AGGCGAAGGC GGGATGAGCC CGCTGATCCA CCCGTCGGCG ATCGTGGCAT GGGAGGCCGC CAACGGCATG CTGAACCCCG GTGAGATCGT GCTGCTGCGC ACCGGCTGGG ACCGGCGCTA CCGACGCGGT GCCGCCGGGG GCGGATATCT TCGTGACGTC CTCGCCGGGC GGAGCCCCGG ATGGCCGGCG CCGACAGAGC CCACAGTGGA GCTACTGCTG ACTCGGGGGG TGCAATGCCT TGGCATTGAC GCGCCGTCGA TCGGCCCGGC GCACGATCCG GTGGGCGTGC ATGTGCGGGG CCTGGGACAG GGAATGGTCT ACGTCGAGTG TCTCGCCGCG CTCGACGCGC TGCCCCCTCG CGGCGCGTGG TTTTGTTTCC TTCCCATCAA GGTGGAGGGC AGCACTGGGG CTCCTGGCCG GGCGATCGCC CTGATGCCGG CCACGGAGTC GTGA
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Protein sequence | MLDGSAVHGQ SAVPAGYQVV DLSVTIAEDL PCYWEGHQPF QHKTWNWFAD HRNAMASVYS RGGPYATRWM AIDEHTGTHF DAPLHFIPPP DSGLPGAGPA GAISADQVGL ASLMGAAAVI DVASPGGGEG GMSPLIHPSA IVAWEAANGM LNPGEIVLLR TGWDRRYRRG AAGGGYLRDV LAGRSPGWPA PTEPTVELLL TRGVQCLGID APSIGPAHDP VGVHVRGLGQ GMVYVECLAA LDALPPRGAW FCFLPIKVEG STGAPGRAIA LMPATES
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