| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1027 |
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| Symbol | |
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| ID | 5057473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 1163691 |
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| End bp | 1164458 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640473296 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001157879 |
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| Protein GI | 145593582 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.162923 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAACG GTGGGCGCCT ATCGGGAAAA GTAAGTCTGA TCACCGGCGC CGCGCATGGC
ATAGGCCATG CCACGGCTGT GTGGTTCGCC CGCGAGGGAG CCCGGCTGGT GGTCAGCGAC
GTGGACGGTG CCGCACTGGA GAAGTGCCAC GCCGAACTGG CCGAGTCCGG AGCCGAGGTG
ACGACGGTGA TCGCCGACGT CTCAGACGCC ACCCAGGCAC ACCGCATGGT TCAGACGGCC
GTCGATGTCT ACAACCGGCT GGACGTCGTG GTCGCCAACG CTGGCGTGAT CCCTCTGCAC
GAGATCACCG AGGCGACCGA GCAGGACTGG GATGAGGTCA TGGCCGTCGA TGGCAAGGGC
ATGTTCCTCA CGTGCAAGTA CGGCATTGAC GCCATGCTGG CCACGGGCGG CTCGATCGTG
TGCCTTTCAT CTATCTCCGG CGTCGCTGGC CAGCGGGGGC AGAGCACGTA CGGCCCGGCC
AAGTTCGTGG CTTCCGGGCT CACCAAGCAC TTGGCCGTCG AATGCGCACG ACACTGCATC
CGGGTCAACG CGGTCGCTCC CGGGACTATC CGCACCAACC GGGTCCGCCG GCTCGAAGAA
GAACCGGGCG GTCCGGAGTA CCTGGAGGAC ATCGTCCGGC TCCATCCAGC CGGACGCCTG
GGCGAGCCGT CGGAGGTGGC AGCCGCGATC GGATTCCTGG CCTCCGACGA GGCCTCGTTC
ATCACGGGTG TAGTACTTCC CGTCGACGGA GGTTACCTCG CGCAGTGA
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| Protein sequence | MTNGGRLSGK VSLITGAAHG IGHATAVWFA REGARLVVSD VDGAALEKCH AELAESGAEV
TTVIADVSDA TQAHRMVQTA VDVYNRLDVV VANAGVIPLH EITEATEQDW DEVMAVDGKG
MFLTCKYGID AMLATGGSIV CLSSISGVAG QRGQSTYGPA KFVASGLTKH LAVECARHCI
RVNAVAPGTI RTNRVRRLEE EPGGPEYLED IVRLHPAGRL GEPSEVAAAI GFLASDEASF
ITGVVLPVDG GYLAQ
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