| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1017 |
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| Symbol | |
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| ID | 5057463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 1145798 |
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| End bp | 1147576 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640473286 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001157869 |
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| Protein GI | 145593572 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.145908 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGACCC GGCCTAACCC ACTCTTCGTC GGCATCGAGC GCGCCCCAGC GCGCGCCTCC
ATGCGCGCCA CAGGTCTGTC GACCGAGGAC CTGAAGAAGC CGATGATCGG GGTAGCGCAC
AGTTGGATCG GCACGATGCC GTGCAACCTC AACCACCGGC GGCTCGCCCA GGAGGTGATG
GCCGGCGTGC GCGCCGCAGG TGGCACCCCG ATCGAGATCA ACACCATCGC GATCTCGGAC
GTGATCACCA TGGGCACGGA GGGAATGCGG ACCTCACTGG TGAGCCGCGA GGTGATCGCC
GACTCCATCG AGTTGGTATG CCGCGGCCAC GGTCTCGACG GCCTGGTGAC CCTGGCCGGC
TGTGACAAGA CCATACCCGG TGCGGCGCTG GCCCACGTGC GACTCGACAT CCCCGGAGCC
GTCATCTATT CCGGCACGAT GATGCCGGGC GAGCACCTCG GGCGCGACAT CACCCTGCAG
GATGTGTTTG AGGCCGTCGG CAGCGCCACC GCCACCGGCT GCACCGACGA GCTCGACAAG
CTCGAGCGCG CGGCCTGTCC CGGTATCGGG GCCTGCGCGG GCCACTACAC GGCCAATACG
ATGGCCGTGG TGCTGGAGTT CCTCGGGCTT TCCCCGTTCG GCTCGATGGA TCCGCCGGCA
GTCGACGCCC GCAAGGACAC GGTCTGCCGC CAGGCCGGCG AGCTGGTCAT GCGGGCGGTG
GCAGAAGGGC TGCGGCCCAG CCGGTTCCTG ACGCCCTCCT CGTTGCGCAA CGCCATCGCC
GCCGGGGTCG CCACCGGCGG CTCGACGAAC ATGGTGCTCC ACCTGTTGGC GATCGCTCGG
GAGGCGGGCA TCCCGCTGGA CATTGACGAG TTCGACCGGA TCAGCTCGGT GACCCCGATC
ATCGCTGACC TGCGTCCAAA CGGGACGTAC ACCGCGGTGG ACCTCGACCG GGCGGGCGGC
ACCCGGGTGA TCGCCCGCCA CATGGTCGAC GCGGGCCTGA TTGCTGGCGA CGAAAGCACC
GTCACCGGCC GCACCGTCGC ACACGAGGCC GCGGACGCGG CCGAGACACC CGGCCAACGG
GTCGTCACCA CGGTGGAGGC ACCCCTATCG CCTTCCGGTG CTCTCCTGAT CTTGCGGGGT
AACCTAGCGC CCGATGGCAG TGTGGTGAAG GCACCCGGCG CGGTGACCCT GCGGATGACC
GGCACCGCAT TGGTGTTCAA CTGCGAGGAG GAAGCGATGG CCGCGGTCCA GACTGGCCGC
GTCCGGCCAG GCCACGTCGT CGTCATCCGC TACGAGGGTC CGCGCGGGGG TCCAGGGATG
AGGGAAATGC TCGGAGTGAC CTCGGCGCTC ATCGGCCGCG GCCTGGGCAC GTCGGTCGGT
CTGGTGACCG ACGGCCGTTT CTCGGGCGCG ACCAGGGGAC TGATGGTGGG GCACGTCGCT
CCGGAGGCGG CGGAGGGCGG ACCGATCGCG GCGGTGTGCG ACGGTGACCG GATCACCATC
GACCTGCAGC GGCGCGAATG CTCTGTCGAC CTGGATCCGG GCGAACTGGC CGCGCGGATG
CGAGACTGGT CGGCTCCGCC ACCGCGCTAC ACGATCGGCG TCATGGCCAA ATACTGGTCG
ACGGTCTCGT CGGCGGCCGT GGGCGCCGTG ACGACCCCGC ACCCCACCCA GGGCCCGGCG
ACAGCGTCAG GTAAGGCCGA GGAGTGCCAG CAGGCGAGTG CGGTCGAGGG CGTGATGGCG
GTTGGCGGCG GCGATGTCGG TGCTGCCGGC GGTTCGTAG
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| Protein sequence | MTTRPNPLFV GIERAPARAS MRATGLSTED LKKPMIGVAH SWIGTMPCNL NHRRLAQEVM
AGVRAAGGTP IEINTIAISD VITMGTEGMR TSLVSREVIA DSIELVCRGH GLDGLVTLAG
CDKTIPGAAL AHVRLDIPGA VIYSGTMMPG EHLGRDITLQ DVFEAVGSAT ATGCTDELDK
LERAACPGIG ACAGHYTANT MAVVLEFLGL SPFGSMDPPA VDARKDTVCR QAGELVMRAV
AEGLRPSRFL TPSSLRNAIA AGVATGGSTN MVLHLLAIAR EAGIPLDIDE FDRISSVTPI
IADLRPNGTY TAVDLDRAGG TRVIARHMVD AGLIAGDEST VTGRTVAHEA ADAAETPGQR
VVTTVEAPLS PSGALLILRG NLAPDGSVVK APGAVTLRMT GTALVFNCEE EAMAAVQTGR
VRPGHVVVIR YEGPRGGPGM REMLGVTSAL IGRGLGTSVG LVTDGRFSGA TRGLMVGHVA
PEAAEGGPIA AVCDGDRITI DLQRRECSVD LDPGELAARM RDWSAPPPRY TIGVMAKYWS
TVSSAAVGAV TTPHPTQGPA TASGKAEECQ QASAVEGVMA VGGGDVGAAG GS
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