| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1005 |
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| Symbol | |
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| ID | 5057451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 1125471 |
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| End bp | 1126163 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640473275 |
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| Product | CRISPR-associated Cas family protein |
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| Protein accession | YP_001157858 |
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| Protein GI | 145593561 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1583] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR01877] CRISPR-associated endoribonuclease Cas6 |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGTTCT ACGTGGACGT CGCAGGGCCG GATGCGGCGC TTCCCTGGAG GTACGTGCAC
GGCGTGGCGC ACGCCGTGGT GTACAGCGTG ATCGCCGAGC AGTCGCCGGC CCTGGCTACC
CAGCTACATG AGGGGACCTG GGCGCCGGCC AACTCCCCCC GGCCGGTGGG GATCTCGCCC
CCGGTCTTCG TCGGCGCCCG GGCCAAGCCC CGCGCGTACA TGATGTCGGG CAAGGGACGG
ATCTGGTTCG GCTCGCCGAT TCCGGTGCTG GCGGCAGCAT TGCTGGCCGG CATCACCAGC
CGTCGCGAGC TGCGATGGGG CCCGGTCACC CTGACAATCA AGGGCACGCA GCTGGAGCCG
ACCGTTGACG CCGAATCCTC CACGGTCCTG GAAACCCGCT CGCCGGTGCT GGTGAAGGCC
AGCGGAAACC GCTACCTGCT CCCCGACGAC GATGGCTTCG TCGGCGCGCT GTTGGCGAAC
ATCCGTCACA AGGCCGACCT GCTCGGCCTG CCGGGCGACG CCGAGGTGCA GGTCGTGGCG
GCGGGGCCAC GGCGACGCTT CGATGTCTCG GGGGGCATCC GGATCGGGGC GACCGCGACG
GTGCGCCTCG ATGCCGACCC CCGCCTGATC GCGGCACTCC GCGAGTGGGG TCTCGGGTTG
TCCACCATTC AGGGGTTCGG GTGGGTCCGG TGA
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| Protein sequence | MRFYVDVAGP DAALPWRYVH GVAHAVVYSV IAEQSPALAT QLHEGTWAPA NSPRPVGISP
PVFVGARAKP RAYMMSGKGR IWFGSPIPVL AAALLAGITS RRELRWGPVT LTIKGTQLEP
TVDAESSTVL ETRSPVLVKA SGNRYLLPDD DGFVGALLAN IRHKADLLGL PGDAEVQVVA
AGPRRRFDVS GGIRIGATAT VRLDADPRLI AALREWGLGL STIQGFGWVR
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