Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1000 |
Symbol | |
ID | 5057446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 1119365 |
End bp | 1119883 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640473270 |
Product | hypothetical protein |
Protein accession | YP_001157853 |
Protein GI | 145593556 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1468] RecB family exonuclease |
TIGRFAM ID | [TIGR00372] CRISPR-associated protein Cas4 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCACTG ACCGAGACAC CGACGACACC GACGAGATCG GTGGAGTTCA CGTCAGGTAC CTGCTGCACT GCCCTCGACA ACTGTGGCTC TACAGCCACG GCTACCGGCC GGAGGCCCGC AACGAGGCCG TGGCCTTCGG CGAGAGCGTT GACGACACGA CATACCGCCG ACATGCCGGT GTCGATCTTG GAGCGGCAAG GATCGACTGG GTCACCCGAG GGGCCATCGT CCACGAGACG AAATCCTCTC GCGAGCCCTC GCCGCAACAC AATGCTCAAG TCCTGCACTA CTGCCTTTTG CTCGCCCGAC GCGGGGTGAC CATTCGTGGC GGCGTCGTGC ACTATCCACT GATCCGACGA GCTGTCAAGA TCAACTGGGA CGCTCGGGCG CGCCGCATCG CCGAGGAGAC CGAGGTGAAA ACGCGTCAGG TCATCGCCAC CGACGCCCCC GCGCCACGGC TGCCCCGCGC GCAGTGCCGT GGATGTTCCT ACCGCGACTA CTGTTGGGGA GACTCGTGA
|
Protein sequence | MTTDRDTDDT DEIGGVHVRY LLHCPRQLWL YSHGYRPEAR NEAVAFGESV DDTTYRRHAG VDLGAARIDW VTRGAIVHET KSSREPSPQH NAQVLHYCLL LARRGVTIRG GVVHYPLIRR AVKINWDARA RRIAEETEVK TRQVIATDAP APRLPRAQCR GCSYRDYCWG DS
|
| |