| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0986 |
|---|
| Symbol | |
|---|
| ID | 5057431 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 1105203 |
|---|
| End bp | 1106006 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640473255 |
|---|
| Product | 5'-methylthioadenosine phosphorylase |
|---|
| Protein accession | YP_001157839 |
|---|
| Protein GI | 145593542 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0005] Purine nucleoside phosphorylase |
|---|
| TIGRFAM ID | [TIGR01694] 5'-deoxy-5'-methylthioadenosine phosphorylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTCCCA CGGCAGAGTT GGCGGTGATC GGCGGGTCGG GGCTGTACGC CCTGCTCGAC
GGCGCCACCG AGCACGTGAT CGACACCCCA TACGGTCCAC CGTCCGACGC GGTCACTATC
GCGGAGGTCG CGGGGCGCCG ATTGGCGTTC CTGCCCCGGC ATGGCCGGGA CCACCGGCAT
CCGCCGCACC AGATCCCCTA CCGGGCCAAC CTGTGGGCGC TGCGCTCGCT CGGCGTTCGC
CAGGTGCTCG CCCCCTGCGC GGTCGGCGGC CTGCGCCCGG AGCTGGGTCC CGGCACGTTC
GTCGTGCCCG ACCAGCTGAT CGATCGCACC AGCGGTCGGG CGCAGACCTA CTACGACCGG
GGTGCGGTGC ACGTCTCCTT CGCCGACCCG TACTGCCCGG TCGGGCGGCG TACGCTGCTC
GCCGCCGGCG CCCAGCGGGG CGTGCCGACG GTGGACGGCG GGACGGTGGT GGTCGTCGAG
GGTCCCCGCT TCTCCACCCG TGCCGAGTCG CGCTGGTTCA CGGCGATCGG CGGGACGGTG
GTCAACATGA CCGGCCATCC GGAGGCGGTG CTCGCCCGGG AGCTGGCCCT CTGTTATTCG
TCGATTGCGC TCGTCACCGA CCATGACGTG GGGGTGCCGG GCGGCGGATC GGTGACCCAG
GAGGAGGTGT TCCGGGTCTT CGGCGAGAAC ACCGCCCGCT TGCGGGAGCT GCTCTTCACC
GCGGTGGCCC AGCTGCCGGC CGATCGGGAC TGCGCCTGCG GAGCGACCCT GGACGACATC
AGGCTTCCCT TCGCGCTGCC CTGA
|
|---|
| Protein sequence | MSPTAELAVI GGSGLYALLD GATEHVIDTP YGPPSDAVTI AEVAGRRLAF LPRHGRDHRH
PPHQIPYRAN LWALRSLGVR QVLAPCAVGG LRPELGPGTF VVPDQLIDRT SGRAQTYYDR
GAVHVSFADP YCPVGRRTLL AAGAQRGVPT VDGGTVVVVE GPRFSTRAES RWFTAIGGTV
VNMTGHPEAV LARELALCYS SIALVTDHDV GVPGGGSVTQ EEVFRVFGEN TARLRELLFT
AVAQLPADRD CACGATLDDI RLPFALP
|
|---|
| |