| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0973 |
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| Symbol | |
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| ID | 5057417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1091380 |
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| End bp | 1094295 |
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| Gene Length | 2916 bp |
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| Protein Length | 971 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640473242 |
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| Product | preprotein translocase, SecA subunit |
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| Protein accession | YP_001157827 |
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| Protein GI | 145593530 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.16094 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.911807 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGATTC TGGAAAAGGT CCTCCGTGCG GGCGAGGGGC GCCTGGTGCG CCGGCTCAAG
GCGATCGCCG CCGCCGTCAA CTCGATCGAG GACGACTACG TCAACCTCAC CGACGACGAG
CTGCGGGAGA TGACCGCGCA GTTCCGGGAA CGGCTGGATG ACGGCGAGAC CCTTGATGAT
CTGTTGCCCG AGGCGTTCGC GGTCTGCCGC GAGGGTGCTG CCCGGGTGCT CGGTCAGCGC
CCGTACGACG TCCAGGTGAT GGGTGGGGCG GCGCTGCACT TCGGCAACAT CGCCGAGATG
AAGACCGGCG AGGGGAAGAC CCTCACCTCG GTCATGCCGG TCTACCTCAA CGCGCTCTCC
GGCAAGGGCG TGCACGTGAT CACGGTCAAC GACTACCTGG CCGAGCGAGA CGCCGCCTGG
ATGGGCCGGG TGCACGAGTT CCTCGGGCTC ACCGTTGGCG TCGTGCTGCC CAACCGGCCC
GCCGCCGAGC ACCGCGCCGC CTACGAGTGC GACATCACCT ACGGCACCAA CAACGAGTTC
GGCTTTGACT ACCTGCGCGA CAACATGGCC TGGTCGAAGG AGGACCTGGT CCAGCGGGGC
CACAACTTCG CCGTCGTGGA CGAGGTCGAC TCGATCCTGA TCGACGAGGC CCGCACCCCG
TTGATCATTT CCGGTCCGGC CGAACACTCC GCCCGCTGGT ACGGCGAGTT CGCCGCGGTG
GTCGCCCGCC TCCAGTCCGG CAAGGACGGC GAGGGCGACT ACGAGGTCGA CCACGCCAAG
CGCACGGTCG CGGTGACGGA GCGGGGAGTC GGCAAGGTCG AGGACCGGCT CGGCATCGAC
AACCTCTACG AGTCGGTCAA CACGCCACTG GTCGGTTACC TGAACAACGC GATCAAGGCG
AAGGAGCTCT TCAAGCGGGA CAAGGACTAC ATCGTCAGCG AGGGCGAGGT TCTCATCGTT
GACGAGTTCA CCGGCCGCAT TCTGCACGGG CGCCGCTACA ACGAGGGCAT GCACCAGGCG
ATCGAGGCCA AGGAGGGGGT GGAGATCAAG CAGGAGAACC AGACCCTGGC CACCATCACC
CTCCAGAACT ACTTCCGCCT CTACGAGAAG CTCGCCGGCA TGACCGGTAC CGCCCAGACC
GAGGCGGGCG AGTTCAACAA GGTCTACAAG GTCGGGGTGG TGACCATCCC GACGCACCGG
CCAATGGTCC GGGAGGACCG CTCCGACGTT ATCTACAAGA CCGAGAAGGC CAAGTTCAAC
GCAGTCGTCG AGGACATCGC CGAGCGGCAC CACGCCGGCC AGCCGGTGCT CGTCGGCACG
GTCTCGGTGG AGAATTCCGA GATCCTCTCC CAGCTCCTGC GCCGTCGGGG AATCCCGCAC
TCGGTGCTGA ACGCGAAGTT CCACGCGCGC GAGGCGGAGA TCGTCGCCCA GGCCGGTCGC
AAGGGCGCGG TCACCGTCGC CACCAACATG GCTGGCCGCG GCACCGACAT CCTGCTCGGT
GGGAATCCCG AGTTCCTCGC CGCCAACGAC CTGCGTCAGC GCGGGCTCGA CCCGACCGAG
CACGAGGAGG AGTACGCCAA GGCGATGGAG GAGGTCCTGC CCACCTGGAA GCAGGCCTGC
GACGACGAGG CGGAGGAGGT CTCCGCCGTG GGCGGCCTCT ACGTGCTGGG CACCGAGCGG
CACGAGTCCC GGCGCATCGA CAACCAGCTG CGCGGCCGAT CGGGTCGCCA GGGGGACCCG
GGTGAGTCCC GTTTCTACCT GTCGCTGCAG GACGAGTTGA TGAAGCGTTT CCGCTCCGGC
GCCGTCGAGG CCGTCATGGA GCGCTTCAAC ATCCCGGAGG ACGTGCCCAT CGAGTCGAAG
ATGGTCACCC GCCAGATCAA GACCGCGCAG GCGCAGATCG AGTCCCAGAA CGCCGAGATA
CGCAAGAACG TCCTCAAGTA CGACGAGGTC ATGAACAAGC AGCGGCAGGT GATCTACGCT
GAGCGGCTTC GGGTGCTCAA CGGCGAGGAC CTGTCGGACC AGGTCCGGAA CATGATCGAC
GATGTCGTCG AGGCGTACGT CCGCGGCGCC ACCGCGGAGG GCTACGCCGA GGACTGGGAT
TTCGAGCAGC TCTGGTCCAG CCTCAAGCAG CTCTACCCGG TGGGCATCAC CATCGAGGAG
TTGGAGGAGG AGGCCGGCGG ATCGCGGGCG AGCATTGACG TCGACTTCCT GCTCAGCCGC
CTGAAGGAGG ACGCGCACGC CGGGTACGAC CGCCGCGAGG AGGAGCTCGG TGCGGAGGGC
GTCCGCCAGC TCGAGCGGAT GGTCCTGCTC CAGGTGATCG ACCGCAAGTG GCGTGAGCAC
CTCTACGAGA TGGACTACCT CCAGGAGGGC ATCAGCCTTC GGGCCTACGC CCAGCGGGAT
CCGGTGGTGG AGTATCAGCG CGAGGGCTTC GACATGTTCG CCACCATGAT GGACGGCATC
AAGGAGGAGA CGGTCGGTTT CCTCTACAAC CTGGACGTGC AGGTCCAGGA GTCGGAGCCG
GCGGCCGACG AGGTCAAGCT CCTGGAGAAG CCGGTCGAGG TCCGGGCCAA GGGCCTCGGT
CGTACGCCAC AGCAGCAGGG CCTGCAATAC TCCGCGCCGA CCATCGATGG GGAGGCCGGG
CGCGGCTCGG TCGCCGTCGA GCGGGCCGAG GAGGCCGCGC CGCAGGAGGG GCGGCCCGCC
ATGACCGCTC CGGCCGCCCC CGGGCAGTCC GCTCCCACCG CCCCCCAGCG GCCGGGAAAT
CGCGCGCGTG GCCACGCCGT CGCCGCCGGC ACCGCCCGCC GGGCGGCACC GGGGCAGGCC
GAGGGTGGCA ACGGACCGTC GCGCAACGCG CCGTGTCCGT GTGGCTCGGG CCGCAAGTAC
AAGCGCTGCC ACGGCTCGCC TAACGGCGGC GCCTGA
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| Protein sequence | MSILEKVLRA GEGRLVRRLK AIAAAVNSIE DDYVNLTDDE LREMTAQFRE RLDDGETLDD
LLPEAFAVCR EGAARVLGQR PYDVQVMGGA ALHFGNIAEM KTGEGKTLTS VMPVYLNALS
GKGVHVITVN DYLAERDAAW MGRVHEFLGL TVGVVLPNRP AAEHRAAYEC DITYGTNNEF
GFDYLRDNMA WSKEDLVQRG HNFAVVDEVD SILIDEARTP LIISGPAEHS ARWYGEFAAV
VARLQSGKDG EGDYEVDHAK RTVAVTERGV GKVEDRLGID NLYESVNTPL VGYLNNAIKA
KELFKRDKDY IVSEGEVLIV DEFTGRILHG RRYNEGMHQA IEAKEGVEIK QENQTLATIT
LQNYFRLYEK LAGMTGTAQT EAGEFNKVYK VGVVTIPTHR PMVREDRSDV IYKTEKAKFN
AVVEDIAERH HAGQPVLVGT VSVENSEILS QLLRRRGIPH SVLNAKFHAR EAEIVAQAGR
KGAVTVATNM AGRGTDILLG GNPEFLAAND LRQRGLDPTE HEEEYAKAME EVLPTWKQAC
DDEAEEVSAV GGLYVLGTER HESRRIDNQL RGRSGRQGDP GESRFYLSLQ DELMKRFRSG
AVEAVMERFN IPEDVPIESK MVTRQIKTAQ AQIESQNAEI RKNVLKYDEV MNKQRQVIYA
ERLRVLNGED LSDQVRNMID DVVEAYVRGA TAEGYAEDWD FEQLWSSLKQ LYPVGITIEE
LEEEAGGSRA SIDVDFLLSR LKEDAHAGYD RREEELGAEG VRQLERMVLL QVIDRKWREH
LYEMDYLQEG ISLRAYAQRD PVVEYQREGF DMFATMMDGI KEETVGFLYN LDVQVQESEP
AADEVKLLEK PVEVRAKGLG RTPQQQGLQY SAPTIDGEAG RGSVAVERAE EAAPQEGRPA
MTAPAAPGQS APTAPQRPGN RARGHAVAAG TARRAAPGQA EGGNGPSRNA PCPCGSGRKY
KRCHGSPNGG A
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