Gene Strop_0972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0972 
Symbol 
ID5057416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1089975 
End bp1091102 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content74% 
IMG OID640473241 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001157826 
Protein GI145593529 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.407544 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.945637 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCGG AGACCATCGA CGGGCCCGGG ATCCGACTGC GTTTGTCCCG CCTCGAGGAC 
ATCTCCGACA CCGCGGCCGC CTGTGCCGAC CCGCTGATCC AGCACTTCCT GCCGGCGCTG
CCGTCGCCGT ACACCGAGGC GGACGCCCGG TGGTGGATCA CCGAAGGGGC ACCCGCGGCC
TGGGCCGGCG GTGGGGCCGC GTACACCATC GCGGACCGTG TCACGGACCG ACTTCTCGGC
ACGATCGGGC TGAACGACCC GGTCCCCAGT CGCCAGGAGG CCGCAATCGG ATACTGGGTC
GCCCCGTGGG CGCGGGGGCG CGGCGTCGCC ACGGCGGCGA CCCAGACCCT CGCCGACCGG
GCGTTCGCCA GCGGAACGCG CCGGCTGGAG CTACTCACCG TCGCAGAGAA CATCGCCAGC
CAGCGGGTGG CGCTGGCCGC CGGCTTCCGC CCCGAGGGTG TACGCCGGTT GGCGAGCCGC
GGCCGAGACG GCGAACGGGC CGATCTCCTC ACCTGGGCGC GGCTCGCCGA CGACCCCCCG
GGGCCGGCTC CACGGTTGCT ACCGGACCTA CCCGACGGCC GGCTCACCGA CGGCGTGGTA
GAGCTCCGGC CGCGCGACCC GCAGCACGCG GAGGCGATGT ACAACCTGCA CACCCAGCCC
GAGGTGGTCG CCATCCTGGT GCCGCCGGAG CCGCCCCGGC GGGCGGACAT CGAACGGAAC
TGCCGAGAGG GGCAGTCCCG ATGGCTCCGG GACCAGGTCG CGAACCTGGC CATCATCGAC
GCGAGCAGCA GGGCCACCGC CGGCGTCTGC CAACTGGTCT ACGACAACCC GCAGTTCCGA
CAGGCGATGG TCGGCTACGG CCTGCTGCCG GCCTGGCGCG CACGCGGGTA CGCCACCCGT
GCGGTCCGCC TGCTCGCCGA ATGGGGGTTC ACCGAGGTCA AGCTCGACCG GATCTGGGCG
GACACCCACG CCGGCAACGT CGCCTCGGAG CGGGTGTTGG AACGGGCCGG GTTCCGCCGG
GAGGGGCGGG TGCGCGGACG CTTTCCCACC AGCGACGGGC TCCGGACGGA CAGCACACTC
TTCGGCCTGC TCCCCGGCGA CCTCCCGGAG GCACCCGGCA CACGCTGA
 
Protein sequence
MTPETIDGPG IRLRLSRLED ISDTAAACAD PLIQHFLPAL PSPYTEADAR WWITEGAPAA 
WAGGGAAYTI ADRVTDRLLG TIGLNDPVPS RQEAAIGYWV APWARGRGVA TAATQTLADR
AFASGTRRLE LLTVAENIAS QRVALAAGFR PEGVRRLASR GRDGERADLL TWARLADDPP
GPAPRLLPDL PDGRLTDGVV ELRPRDPQHA EAMYNLHTQP EVVAILVPPE PPRRADIERN
CREGQSRWLR DQVANLAIID ASSRATAGVC QLVYDNPQFR QAMVGYGLLP AWRARGYATR
AVRLLAEWGF TEVKLDRIWA DTHAGNVASE RVLERAGFRR EGRVRGRFPT SDGLRTDSTL
FGLLPGDLPE APGTR