| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0971 |
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| Symbol | |
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| ID | 5057415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1089243 |
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| End bp | 1089869 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640473240 |
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| Product | ribosomal subunit interface protein |
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| Protein accession | YP_001157825 |
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| Protein GI | 145593528 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.460165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.854578 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACATCG TGGTCAAGGG CCGGAACGTC GAAGTTCCAG ATCATTTCCG GGTGCACGTA
GCGGAGAAGC TCGCCAAGAT CGAACGCTAC GATCACAAGA TCATCCGGGT TGATGTCGAG
CTGTTCCATG AGCGCAATCC GCGTCAGGCG GACCACTGCC AGCGGGTGGA GATCACCTGC
GTTTCCCGGG GTCCGGTGAT GCGGGCCGAG GCGGGCACGA GCGACTTCTA CAGCGCGCTC
GACGCGGCCA TCGCCCGGCT GGACGCCCGG ATGCGCCGGG CGGCCGACCG CCGTCGGGTC
CACCACGGCC GGCACGCCCC CATCTCCGTC GCCGCCGCCA CCGCCGGGCT CCCGGTTACC
GACCTCGTCG CCGGGCCGCT GTCCGCCGAC GCTGCCACGG CGACGGCGGT CGCCGAGCGG
GCCGAGGAGG AGCACGACGA CCAGCCGTGG CACATCGCGC GGGAGAAGGT CCACCCCGCC
GAGCCGATGA CCATTGACGA CGCCCTGTTC CAGATGGAAC TGGTCGGACA CGACTTCTAC
CTGTTCCAGG ACAAGGAGTC CGGCCGGCCC AGCGTCGTCT ACCGACGGCA CGCCTACGAC
TACGGGATCA TCTCCCTGGC CGTCTGA
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| Protein sequence | MDIVVKGRNV EVPDHFRVHV AEKLAKIERY DHKIIRVDVE LFHERNPRQA DHCQRVEITC
VSRGPVMRAE AGTSDFYSAL DAAIARLDAR MRRAADRRRV HHGRHAPISV AAATAGLPVT
DLVAGPLSAD AATATAVAER AEEEHDDQPW HIAREKVHPA EPMTIDDALF QMELVGHDFY
LFQDKESGRP SVVYRRHAYD YGIISLAV
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