| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0963 |
|---|
| Symbol | |
|---|
| ID | 5057407 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 1078601 |
|---|
| End bp | 1079797 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640473232 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001157817 |
|---|
| Protein GI | 145593520 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGACG GTGCGGCCGG GGTCAGCGGC CACCGGGAAG CCGACGAGGC CCTGCTGGAC
GATCTGGACG CGCTCGCCGA GCGGGATCCG GGTGGGATGC TGCGGCACAT CGCCTCCGGT
GGGGCGCAGG TCCGCGAGTC GGCCGCCCTC GCCGCCGAGG CCAACCTGTC GGTGCTGGCC
GACGAGGGGC GTCCGCGCGC GGTCGTCATC GCGGGAATCG GCACGGCCGG GCGGACCGGT
GACGTGCTGG CGACGGTCGC CGGTCCGCGC TGCCCGGTGC CGGTGATCCC ACATCGCAGC
GCCGGCGTGC CCGGCTGGGT GGGCGCCGCC GACGTGGTGA TCGCGGTCAG CGCCTCTGGT
CGCAGTCCGG AGGCGCTCGG GGCGGCCGAG GCGGCCCACC GCCGGGGTGC CCGCCTCGTC
GCGGTCGGTG CGCCGGACTC CCGGTTACAG TCGGTCGCGG AGCGGGCCCG AGCACCGTTC
GTCCCCGTGC CCCGGCGTGC CCCAGCGCGG GCGAGCCTCT GGGCGCTGAC CGTGCCAGTG
CTGCTGGCCG CCCGGATGCT CGGTCTGGTC AAGGTCAACG AGGCGGACCT GGCGGAGACC
GCCGCCCGGT TGGACGCCGA GGCTGACCGG TGCCGGCCGT CCGCCGAGTC TTTCGTCAAT
CCGGCCAAAT CCCTCGCGTT GGGTCTGGCT GGCTCGATTC CGATCGTCTG GGGGTCGTCA
CCACTGGCCA CCGTCGCGGC TCGCCGCTTC GGTGACACGC TCTCGGCGAA CGCCCGGTAC
CCGGTTGTCT CCGGGGCGCT CGGCGAGGCC GGTCGCGGCC GGGTCGGTCT GCTCGACGGT
GTCTTCGGCG GGCTGGTCGA GGGGGAGCGG GACATTTTCG CCGACCCCGA CCTGACGGCT
GCGGTCGGAA CTCGGCTGCG GCTGGTGCTG CTGCGCGACG GCGGCCTCAA CCCGGAAGAC
GACGCCGACG AACCGCTCGT GGTTGAGGAG CGACGGGCCG ACGCGGTCCA GACCCTCGCC
GAGCGCCGGG GGGTGCGCGC CGACGTGGTC ACCGCCGAAG GAGGCTCGGC GCTGGAGCGG
CTCGCGTCGT TGATCGCGGT GCCGGACTTT GCCTCGATCT ATCTCGCCCT GGCGCACGGT
CTGGATCCGA TGGCCGTGCC CGCTATCACC GAGATGAAGG AGCTGGCCAA TCAGTGA
|
|---|
| Protein sequence | MIDGAAGVSG HREADEALLD DLDALAERDP GGMLRHIASG GAQVRESAAL AAEANLSVLA
DEGRPRAVVI AGIGTAGRTG DVLATVAGPR CPVPVIPHRS AGVPGWVGAA DVVIAVSASG
RSPEALGAAE AAHRRGARLV AVGAPDSRLQ SVAERARAPF VPVPRRAPAR ASLWALTVPV
LLAARMLGLV KVNEADLAET AARLDAEADR CRPSAESFVN PAKSLALGLA GSIPIVWGSS
PLATVAARRF GDTLSANARY PVVSGALGEA GRGRVGLLDG VFGGLVEGER DIFADPDLTA
AVGTRLRLVL LRDGGLNPED DADEPLVVEE RRADAVQTLA ERRGVRADVV TAEGGSALER
LASLIAVPDF ASIYLALAHG LDPMAVPAIT EMKELANQ
|
|---|
| |