| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0958 |
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| Symbol | |
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| ID | 5057402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 1072889 |
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| End bp | 1074169 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640473228 |
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| Product | GAF domain-containing protein |
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| Protein accession | YP_001157813 |
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| Protein GI | 145593516 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.165428 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTTGACC CGTGGCTCGC CCTGGAAATC GGCGTCGATC CGGCGGAGCG GATCGCGCAG
GTAGGTGCCG CCCACACGGC GTTTCTCACC GGGGCGACGC CGCGGCGGGT GCGGGAGGTG
GTACGCCGAT CGTGGGAACG GTCAATGTCG CTCGACCCGG AGAGCAGCCC GCCCGTTGAC
CTCGTTGACG ACACGCTGGA GCGCTACCGG GCCGGGCACC CGCTGGCCCC GGTGCTGCCG
ATCTTCCGGG ACCTGCTCGG TGGGATCGCC CAGGACGGCG CCCATCTGAT GGCGGTCTGT
GACACCCACG GCCGGCTGCT CTGGGTGGAG GGGCACCCGG GGGTACTGCG ACGGGCCGAA
CAGATGAACT TCGTGCCCGG GGCCCGTTGG GACGAGACGC ACGCTGGCAC CAACGCGCCC
GGCACCGCTC TCGCCGTGGA TCACAGCGTG CAGATCTTCG CCACCGAACA CTTCAGCCGC
CGCGTGCAGC GCTGGACCTG TGCCGCCGCG CCGATCCATG ATCCGGCCAC CGGTCGAATA
CTCGGTGCGG TCGACATCAC CGGCGGTGAT CACCTCGCCA CCCCGCAGAG CCTGGCACTG
GTCCGAGCCA CCGCCCGGGC CGCCGAGGCG TTCCTGGCCG GACTCGCCCA GGTCGAGCCG
GACGTGGTGC AGGTGGCCGC ACTCGGCCGG GACGAAGCCC AGCTACGGGT CGGCGGCCGC
CGGATTCGGC TGGGCCGGCG GCACAGCGAA CTGCTGGTGT TGCTGGTGGA CCACCCTGAG
GGGCGTACCG GAGAACAGCT CGCCCTCGAC CTGTACGGCG AGGGCCGACT GCACCCCGTC
ACCCTCCGAG CCGAGCTGTC CCGGCTGCGC CGCGCACTCG GCCCGGAGCT GCTCGACTCC
CGCCCGTACC GGCTGCGCTG CCGGGTGGAC GCCGACTTCC GTACCGTCAC CGACCGGCTG
GAGCGGGGGG ACCCGGCGGG TGGAATCGAC GCGTACTCCG GGAGCTTGTT GCCCGGCTCG
GAGGCGCCGG GCGTGGTGCG GCTGCGCCGG CTGGTCGACG GACAACTCCG TGCGGCCGTG
CTGGCCGCCG CGGACCCGGC GCTGCTCGTC TCCTGGACCG CGACCCCCGC CGGCACCGAC
GACCTGGCAG CCTGGGAGGC CCTGGCGCGG GCACTGCCGC CGGGCGCCCC GCGCCGGCCA
CTCGCCCTGG CGCGGGCCCG CCAGCTCGCC CGGGAGTACG GCGTCACGCG TGCAACGTCG
CTGCAACCTC GAACACAATA A
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| Protein sequence | MVDPWLALEI GVDPAERIAQ VGAAHTAFLT GATPRRVREV VRRSWERSMS LDPESSPPVD
LVDDTLERYR AGHPLAPVLP IFRDLLGGIA QDGAHLMAVC DTHGRLLWVE GHPGVLRRAE
QMNFVPGARW DETHAGTNAP GTALAVDHSV QIFATEHFSR RVQRWTCAAA PIHDPATGRI
LGAVDITGGD HLATPQSLAL VRATARAAEA FLAGLAQVEP DVVQVAALGR DEAQLRVGGR
RIRLGRRHSE LLVLLVDHPE GRTGEQLALD LYGEGRLHPV TLRAELSRLR RALGPELLDS
RPYRLRCRVD ADFRTVTDRL ERGDPAGGID AYSGSLLPGS EAPGVVRLRR LVDGQLRAAV
LAAADPALLV SWTATPAGTD DLAAWEALAR ALPPGAPRRP LALARARQLA REYGVTRATS
LQPRTQ
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