Gene Strop_0956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0956 
Symbol 
ID5057400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1070945 
End bp1071343 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content68% 
IMG OID640473226 
Producthypothetical protein 
Protein accessionYP_001157811 
Protein GI145593514 
COG category[S] Function unknown 
COG ID[COG3564] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.387626 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACC TGGTAACCGT GACCCCCGCA GCGGCCGACC TGATCCGGTC GCTGCGGGAG 
CAGCATGGGC CGTTGATGTT CCACCAGTCC GGTGGCTGCT GCGACGGCAG CGCGCCGATG
TGCTACCCCG CTGGCGAGTT CCGCACCGGC TCGTCGGACA TCCGGCTGGC GGCGCTGGTG
GTGGATGGCG TGCCAGAGCC GGTCGAATTC TGGATCTCGC GCGCCCAGTG GGAGCTCTGG
CAGCACACGA AGCTCACCAT TGACGTGGTT CCCGGCCGTG GCAGCGGATT CTCCCTGGAA
GCCCCGGAGG GCCTGCGCTT CCTCCTTCGC TCCACCCTCA TCCGCCGTGA TCACCAAAGG
GGCGCGAGGT CGGAACACCA ACAGAGCAGG GTCGAGTAG
 
Protein sequence
MSDLVTVTPA AADLIRSLRE QHGPLMFHQS GGCCDGSAPM CYPAGEFRTG SSDIRLAALV 
VDGVPEPVEF WISRAQWELW QHTKLTIDVV PGRGSGFSLE APEGLRFLLR STLIRRDHQR
GARSEHQQSR VE