| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0941 |
|---|
| Symbol | |
|---|
| ID | 5057385 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 1056723 |
|---|
| End bp | 1057322 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640473211 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_001157796 |
|---|
| Protein GI | 145593499 |
|---|
| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
|---|
| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.0785282 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.918248 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCAACGC CCGATCTCCG AGCCGGCTCG CAGGCCGATC CCGCCCTGCA CGCCGATGCC
CTCACCGTGC TGCGTGGCTG GGTGCCCACG TCGGCGGCCG CCGCCGATGC CCGGGACCGA
ACGCTGGACC TCCTCACCGC CGGGCCGGAA GCGATGAGCC GAACGCACCG GGCCGGCCAC
GTCACCGCCA GCGCGCTGGT GCTCGACGCC ACCGGTTCCC AGGTGCTGCT CTGCCTGCAC
GGCAAGCTCC ACCAGTGGGT GCAGCTCGGC GGGCACTGCG AGCCCGACGA TCCGACCCTG
GCCGCGGCGG CGCTGCGGGA GGCGACCGAG GAGTCCGGCG TGACCGGCCT GCGGATCGAT
CCGGTGCCGA TCGACGTGGA CATTCATCCG GTCACCTGCC AGGGCGGCTC ATTCCACCAC
GACGTACGCT TCGCCGTCCT CGCCCCGCCC GGCGCACGGC TCCAGGTCAG CGAGGAGTCC
GAGGAGCTGG GCTGGTTTCC ACCGAACCAG CTTCCGACTC CGTTGGCCGG CGGGACCACC
CAGCTGATCA GACCGGCACT GGCGGCGCTC AGACGAGCCC CACTTCACCC CGCTCCTTGA
|
|---|
| Protein sequence | MSTPDLRAGS QADPALHADA LTVLRGWVPT SAAAADARDR TLDLLTAGPE AMSRTHRAGH
VTASALVLDA TGSQVLLCLH GKLHQWVQLG GHCEPDDPTL AAAALREATE ESGVTGLRID
PVPIDVDIHP VTCQGGSFHH DVRFAVLAPP GARLQVSEES EELGWFPPNQ LPTPLAGGTT
QLIRPALAAL RRAPLHPAP
|
|---|
| |