Gene Strop_0938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0938 
Symbol 
ID5057382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1053615 
End bp1054304 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content74% 
IMG OID640473208 
Producthypothetical protein 
Protein accessionYP_001157793 
Protein GI145593496 
COG category 
COG ID 
TIGRFAM ID[TIGR03089] conserved hypothetical protein TIGR03089 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.988158 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACA ACCTTGCCCG GGTCCTCGCG GACGCGATCG CACCCGACCC GACCCGACCG 
CTGCTCACCT GGTACGACGA CGCCACCGGC GAACGCACCG AACTCTCTGG CGCTACCTGC
GCGAACTGGG TGGCCAAGAC CGCCAATCTG CTGGTCGACG GGGTGGGACT CGCACCCGGC
GATACCGCCG GAGTACTCCT GCCCCCGCAC TGGCAGACCG CCGCCGTGCT ACTCGGATGC
TGGTCGGCTG GCCTCACCGT GGCTGACTCG CCCGACGACG TGGACGTTCT CTTCGTCGCC
ACCGGCCGGG TGGCCGAGGC GGACCGATCC TACGCCGGTG ACCGCTACCT ACTCGCGCTG
GACCCGTTCG CCCGGCCGCT ACGGGAGGTG CCACCGGGGT ACGCGGACTT CGCGTCCGAG
GTACGGACGC ACGGCGACCA CTTCGGGGCG CCCGCACCCG GCGGGCCGGC CCAGGCGGAG
CTGGCCGCCC GGGCGGCGGC GCGCGCCACG GACCTCGGGC TCACCCCCGG CACACGGGTC
CTGATTGACG TCGACCGCTA CCCGGACCCG GTCGACTGGC TCTTGGCCCC GCTGACCGCG
AACGCCTCCA CGGTCCTGGT CGCCCACCCC GACGCCAGCC GTCTCGGCGC CCGCGCCGTC
GCCGAGCGGA CCACCCTCAC CCTGCCTTGA
 
Protein sequence
MADNLARVLA DAIAPDPTRP LLTWYDDATG ERTELSGATC ANWVAKTANL LVDGVGLAPG 
DTAGVLLPPH WQTAAVLLGC WSAGLTVADS PDDVDVLFVA TGRVAEADRS YAGDRYLLAL
DPFARPLREV PPGYADFASE VRTHGDHFGA PAPGGPAQAE LAARAAARAT DLGLTPGTRV
LIDVDRYPDP VDWLLAPLTA NASTVLVAHP DASRLGARAV AERTTLTLP