Gene Strop_0919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0919 
Symbol 
ID5057363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1026986 
End bp1027408 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content70% 
IMG OID640473189 
Producthistidine triad (HIT) protein 
Protein accessionYP_001157774 
Protein GI145593477 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.420438 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.191843 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGAT GTGTGTTCTG CGGGATCGTG GCGGGCAGGG TGCCGGCGTT CCGGGTCGTG 
GACGAGCCGG ACGGGGTGGC CTTCCTGGAC ACCCGGCCGG TGTTCAAGGG ACACCTGCTC
GTGGTGCCGC GTTCGCACCT GGTTACGCTG GCCGACCTAC CGGTGGAAGC GCTGACGGGC
TACTTCGGGT TGGTCCGCCG ACTCACCGTC GGGGTCGAGG CCGGGCTGGG TGCCGGCGGC
ACATTCGTGG CGATAAACAC CAAGGTGTCG CAATCGGTTC CCCACCTGCA CACCCATGTG
GTGCCGCGGA CCAAGGGCGA CGGGCTGCGC GGATTCTTCT GGCCCCGCAC CCGCTACGTG
GACGACGCCG AGGCAGCCAG CCACGCCGAC CGGATCCGCG CGGCGCTGCC GGGTCGTGCC
TGA
 
Protein sequence
MSGCVFCGIV AGRVPAFRVV DEPDGVAFLD TRPVFKGHLL VVPRSHLVTL ADLPVEALTG 
YFGLVRRLTV GVEAGLGAGG TFVAINTKVS QSVPHLHTHV VPRTKGDGLR GFFWPRTRYV
DDAEAASHAD RIRAALPGRA