Gene Strop_0903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0903 
Symbol 
ID5057346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1009009 
End bp1010409 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content73% 
IMG OID640473172 
Producthypothetical protein 
Protein accessionYP_001157758 
Protein GI145593461 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCGT CCACCGTGCC GCCGCACCTG GCGCAACCGC CGGAGCAGAC CGCTGGCTGG 
ACGCCGACCT GGGCGCTCGG TCGGGCGGTG CTTCTGACCG GTCTGCTCCT GATCGCCGGC
GTGCTGTTCG GGCGGGTTGA CCTGGTCGTG TTGGCCGCCC CGTTCGCGAT CGGCACCGCG
TACGCCCTGC GCCGCCGGCC CGCCGCGTTG CCGCAGGTCC AGATCGCCGC CGAGGGGAAC
CAGGTGGAGG GGGGCGAGCT GTCTGGGCAG GTCACCGTCG GCAACCCGGA ATCGGTCGAC
TACGACCTCG CGCTGTTGCA GAGCCGCGCG TCGCGCTGGT TGCAGGTCGA GCGGGTGACC
ATCGCCGGAA CGGCGGCGAC TCGCGCCGCG TCGCACGGCG GACAACCGGT CGTCGACCGT
CCCTTGGCGA CCACCGTGCC GGCTGATGCG CTGGTCGAGG TGGATCTCTA TGGCACCGTG
CGCCGCTGGG GACGGCACCC GCTGGGGCCC GTCGGGGTCC AGGCCTGCGC CGCGCTCGGC
TTACTGGTCT CCCGCCCGGT GGTGGCCGAG GCGGTCCCGG TCAGCACCTA CCCGGTGACT
GAACCCTTCG ATGCGGTAGA GGCGATGCCC CGCGCGGCGG GCCTGGTCGG CGCGCACCAC
TCGCGCCGCC CCGGCGAAGG TGGTGAGCTG GCCGGTGTAC GGGTCTTCGC GCCCGGTGAC
CGGCTGCGTC GGGTTGACTG GCGGGTCTCG CTGCGGGCTC GGCAGCTGCA CGTCGCGGCC
ACCCTCTCCG ACCGGGACGC TGAGGTGGTG CTGCTGCTCG ACGTGCTCGC CGAGGCGGGC
CGCTCCGGCG GCGTCGGGGG CACGGCCTCG GTGCTGGACA CGACGGTCCG AGCCGCTGCG
GCGATCGCGG AGCACTACCT ACACCGCGGG GACCGGGTGT CGATGCTGGA GTACGGTCCG
GCCGGCCGTC GGCTACGTCC CGCCACGGGC CGCCGCCACT ACCTGACCGT GCTGGAGTGG
TTGCTCGACG TGCATCCCCA GCCCTCCCCG CACGAGCCGT ACGACTCGGT CTTTGGACCG
CAGCTGCTCT CGTCGGATGC GTTGGTGGTG GTGCTCACGC CGTTGCTGGA CGAACGATCC
GCGCAGATGT TGGCCCGGCT GGCCTGGTCG GGGCGCTTCG TCGTGGCGGT GGACACCCTC
CCCGATGATC TGGCCCCGTC GCGGGAGCGG CGTTGGTCGG AGGTGGCGCA TCGGCTGTGG
CGACTGGATC GGGACACGAT GCTGTGCCAG TTGCGGGAAC ACGGAGTGCC GGTGGTGCGG
TGGGCCGGCG CGGGCAGCCT GGACGAGGTG CTGCGGGACG TGGTCCGGCT CGCGGCTGCT
CCGAGAGCAG GGGCCCGGTG A
 
Protein sequence
MTSSTVPPHL AQPPEQTAGW TPTWALGRAV LLTGLLLIAG VLFGRVDLVV LAAPFAIGTA 
YALRRRPAAL PQVQIAAEGN QVEGGELSGQ VTVGNPESVD YDLALLQSRA SRWLQVERVT
IAGTAATRAA SHGGQPVVDR PLATTVPADA LVEVDLYGTV RRWGRHPLGP VGVQACAALG
LLVSRPVVAE AVPVSTYPVT EPFDAVEAMP RAAGLVGAHH SRRPGEGGEL AGVRVFAPGD
RLRRVDWRVS LRARQLHVAA TLSDRDAEVV LLLDVLAEAG RSGGVGGTAS VLDTTVRAAA
AIAEHYLHRG DRVSMLEYGP AGRRLRPATG RRHYLTVLEW LLDVHPQPSP HEPYDSVFGP
QLLSSDALVV VLTPLLDERS AQMLARLAWS GRFVVAVDTL PDDLAPSRER RWSEVAHRLW
RLDRDTMLCQ LREHGVPVVR WAGAGSLDEV LRDVVRLAAA PRAGAR