Gene Strop_0894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0894 
Symbol 
ID5057337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1001814 
End bp1002758 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content71% 
IMG OID640473163 
ProductPpx/GppA phosphatase 
Protein accessionYP_001157749 
Protein GI145593452 
COG category[F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0248] Exopolyphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0829909 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACGC GTGCGGCCGC CATCGACTGC GGGACCAACT CGATTCGCCT GTTGGTCGCC 
GATCTGCCGG ATCCGGGTGC CGGAACGGGC GCGCCGTTGG TCGAGCTGAG CCGCCGACTG
GAGACTGTTC GGCTGGGCCA GGGCGTCGAC CGCACCGGTC GGTTGGCCCC GGAGGCGATC
GAGCGGACCC GGGTGGCGCT GGCGGAGTAC GCCGCTGAGA TCGAGAAGTT GGGCGCCGAC
CGAGTCCGGA TGTGTGCCAC GTCGGCCTCC CGGGATGCGG AGAACGCCGC CGACTTCCGC
GACATGGTGG AGCGGACGCT GGGGGTCGCC CCGGAGGTGG TGACCGGGGA TGAGGAGGCG
CGACTGTCGT TCACCGGGGC AGTTCGTGGC CTGCCCGGCT CGATCCGGGA GCCGTACCTG
GTGGTCGACA TCGGCGGCGG TTCGACGGAG TTCGTCGTGG GCACCAGCAC CGGTGGTGTG
GAGGCGGCGA TCTCAGTCGA TGTCGGTTGT GTCCGGATGA CCGAGCGGCA TCTGCAGGGT
GACCCACCGG AGCCCGCCGA GATCAGGGCT GCCGAGGCGG ACATCGTGGC TGCCGTGGAC
CGGGCGCTCG CCGCGGTGCC TGGTCGGGAG GCCGCCTCGC TGGTCGGGCT CGCTGGCTCC
GTCACCACGG TGGTCGCCAT CGCCGAAGGG CTCACCGGAT ACGACCCGCA GCGTATCCAG
CACGCCCGGG TGTCGTACCC GGCGGTGGCG GAGGTGACGG CTGACCTGCT GGTGGCGACC
CGTACGCAGC GGCTGGCGAT CCCGGTGATG CACCCGGGCC GGGCCGACGT GATCGGGGCG
GGTGCCCTGG TGCTCCGGGT GATTATGGAG CGTGCGGGCA AGGATGCCGT GGTCGCCTCC
GAACACGACA TTCTGGACGG CATCTGCTAC AGCCTGCAGC AGTAG
 
Protein sequence
MTTRAAAIDC GTNSIRLLVA DLPDPGAGTG APLVELSRRL ETVRLGQGVD RTGRLAPEAI 
ERTRVALAEY AAEIEKLGAD RVRMCATSAS RDAENAADFR DMVERTLGVA PEVVTGDEEA
RLSFTGAVRG LPGSIREPYL VVDIGGGSTE FVVGTSTGGV EAAISVDVGC VRMTERHLQG
DPPEPAEIRA AEADIVAAVD RALAAVPGRE AASLVGLAGS VTTVVAIAEG LTGYDPQRIQ
HARVSYPAVA EVTADLLVAT RTQRLAIPVM HPGRADVIGA GALVLRVIME RAGKDAVVAS
EHDILDGICY SLQQ