Gene Strop_0892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0892 
Symbol 
ID5057335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1000709 
End bp1001266 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content74% 
IMG OID640473161 
Producthypothetical protein 
Protein accessionYP_001157747 
Protein GI145593450 
COG category[S] Function unknown 
COG ID[COG1507] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.1319 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGTCG TACCACCGCA GGAGCCGGCG GCGTCCTCCG TGCCCTTGCC GCGGCGCGAG 
CCGGCCACGC CAGCCGACCT GGTCGCCGTG GCGGGTCAGC TCGGTCGCCC GCCCCGGGAC
ACCCGGGCGG TGGCCCACCG CTGTCCGTGT GGCGTACCCG ACGTGGTGGA GACGACACCG
CGGCTCGCCG ACGGCACGCC CTTCCCGACG TTGTTCTACC TGACCTGCCC CCGGGCGACG
GCGGCCTGTA GCCGGCTGGA GTCAGCCGGG CTGATGAAGG AGATGGCCGA CCGGCTCGTG
GAGGATCCGG AGTTGGCCGC CCGCTACCGC GCCGCGCACG AGGACTACCT TCGGCGCCGG
GAGGCGATCG GTCATGTGCC GGAGATCGCC GGAATCTCCG CCGGCGGGAT GCCGGATCGG
GTCAAGTGCC TGCACGTGCA CCTCGGGCAT GCGCTCGCGG CCGGTCCCGG TGTCAACCCG
TTCGGGGACG AGGTGCTGAG GCTGGTCGAG CCGTGGTGGG CGGGGGGACC ATGCGTGGCC
GTGCCGGCGG ACGAGTGA
 
Protein sequence
MTVVPPQEPA ASSVPLPRRE PATPADLVAV AGQLGRPPRD TRAVAHRCPC GVPDVVETTP 
RLADGTPFPT LFYLTCPRAT AACSRLESAG LMKEMADRLV EDPELAARYR AAHEDYLRRR
EAIGHVPEIA GISAGGMPDR VKCLHVHLGH ALAAGPGVNP FGDEVLRLVE PWWAGGPCVA
VPADE