Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0892 |
Symbol | |
ID | 5057335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 1000709 |
End bp | 1001266 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640473161 |
Product | hypothetical protein |
Protein accession | YP_001157747 |
Protein GI | 145593450 |
COG category | [S] Function unknown |
COG ID | [COG1507] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.1319 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACAGTCG TACCACCGCA GGAGCCGGCG GCGTCCTCCG TGCCCTTGCC GCGGCGCGAG CCGGCCACGC CAGCCGACCT GGTCGCCGTG GCGGGTCAGC TCGGTCGCCC GCCCCGGGAC ACCCGGGCGG TGGCCCACCG CTGTCCGTGT GGCGTACCCG ACGTGGTGGA GACGACACCG CGGCTCGCCG ACGGCACGCC CTTCCCGACG TTGTTCTACC TGACCTGCCC CCGGGCGACG GCGGCCTGTA GCCGGCTGGA GTCAGCCGGG CTGATGAAGG AGATGGCCGA CCGGCTCGTG GAGGATCCGG AGTTGGCCGC CCGCTACCGC GCCGCGCACG AGGACTACCT TCGGCGCCGG GAGGCGATCG GTCATGTGCC GGAGATCGCC GGAATCTCCG CCGGCGGGAT GCCGGATCGG GTCAAGTGCC TGCACGTGCA CCTCGGGCAT GCGCTCGCGG CCGGTCCCGG TGTCAACCCG TTCGGGGACG AGGTGCTGAG GCTGGTCGAG CCGTGGTGGG CGGGGGGACC ATGCGTGGCC GTGCCGGCGG ACGAGTGA
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Protein sequence | MTVVPPQEPA ASSVPLPRRE PATPADLVAV AGQLGRPPRD TRAVAHRCPC GVPDVVETTP RLADGTPFPT LFYLTCPRAT AACSRLESAG LMKEMADRLV EDPELAARYR AAHEDYLRRR EAIGHVPEIA GISAGGMPDR VKCLHVHLGH ALAAGPGVNP FGDEVLRLVE PWWAGGPCVA VPADE
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