| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0864 |
|---|
| Symbol | |
|---|
| ID | 5057307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 968082 |
|---|
| End bp | 968906 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640473133 |
|---|
| Product | HAD family hydrolase |
|---|
| Protein accession | YP_001157719 |
|---|
| Protein GI | 145593422 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1877] Trehalose-6-phosphatase |
|---|
| TIGRFAM ID | [TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGCCGT TGAATCTGGG CAAGCAGCCG CCGAAAACCC CGTTCACCGC CGACCTCGCC
TGGCAGGCAA CCGCTGCCCG GGCCGCCGGA ACCGTCCTCT TCTTCGACTT CGATGGCACC
CTCGCACCGG TCCGGGACGA CCCGACGTCG GTACACCCCA CGCCGAGGGT GCTCACCGCC
ATCGAGGCGC TCGCTCCCGT CGTGCGCCGG ATCGCGATCG TCTCCGCGCG CCCGGTCGAC
TTCCTCCGCG ACCGACTCGG CGATCTCGCC GGTGTCGACC TCTACGGCCT CTACGGGCTG
GAGCACAGCC ACTCCGGCGG CGAGACCGTC ACCGAGCCGG CGGCACTGCC CTGGGTGCCG
ACCATGGCGG ACCTCGCCGA CGAGGCCCGC ACCGAGCTGC CTGCGGGAGC CCTGGTGGAG
TACAAACGGC TCTCGGTGGC GCTGCACTGG CGGACCGTCC CGCAGCTTGG CCCGGCGGTA
ACACGATGGG GTTCAGCCCG GGCCGAGCAG CTCGGTCTCC GGGTTCAGAC CGGACGGATG
GTTCTGGAGC TGAAGCCGCC GGTCGACCGG GACAAGGGCA TGGTCATCGA CGAGGTGGTG
CGGGACGCGG AGGCCGCCTG GTACTTCGGC GACGACGTAT CGGACATCAA GGCCTTCACG
GCGCTGCGAG CCCGCGCCGC CGCCGAACCG CACTTCTTCG GCGTCTGCGT CGCCGTCGCC
AACCCGGAGA CCGGCGAAGA GGTTGCCGCC GCCGCGGACC TGACCATCGA CTCGCCAGCA
GACCTCGGCG ACTTCCTCAC CGACGCCGCG CGCCGGCTGG CCTGA
|
|---|
| Protein sequence | MPPLNLGKQP PKTPFTADLA WQATAARAAG TVLFFDFDGT LAPVRDDPTS VHPTPRVLTA
IEALAPVVRR IAIVSARPVD FLRDRLGDLA GVDLYGLYGL EHSHSGGETV TEPAALPWVP
TMADLADEAR TELPAGALVE YKRLSVALHW RTVPQLGPAV TRWGSARAEQ LGLRVQTGRM
VLELKPPVDR DKGMVIDEVV RDAEAAWYFG DDVSDIKAFT ALRARAAAEP HFFGVCVAVA
NPETGEEVAA AADLTIDSPA DLGDFLTDAA RRLA
|
|---|
| |