| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0863 |
|---|
| Symbol | |
|---|
| ID | 5057306 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 967180 |
|---|
| End bp | 967950 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640473132 |
|---|
| Product | undecaprenyl diphosphate synthase |
|---|
| Protein accession | YP_001157718 |
|---|
| Protein GI | 145593421 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.658332 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCTGC GGGACGTTGT CTACTCGGTG TACGAACGCC GGCTCACGGC GAAGCTGGCG
GGTAAGCCGG TGCCTCGGCA TGTCGGTGTG ATGTGCGACG GCAACCGCAG ATGGGCGCGG
GAGATGGGGT TCGTCGACCC CAACGACGGC CACCGGGTCG GTGCCGAGCG GATCAAGGAG
CTGCTGCGGT GGTGTGACGC GGCCGGCGTC GGGCACGTGA CGCTCTGGCT GCTCTCCACC
GACAACCTCA CCCGCCCGGC AGCTCAGCTC GATCCGTTGT TGCAGATCAT CGAGGACCTG
ACGAGCGAGT TGGCCGAGGA GGCCAACCCT TGGCGGCTGC GGATGGTCGG GGCGCTCGAC
GTGTTGCCGG CGCAGCATGC GGCGGCACTC AAGGCAGCGG CGGAGCGGAC CCGGGACCGG
GTGGGCGGCG CACAGGTCAA CATCGCCGTG GGCTATGGCG GCCGGCGCGA GATCGCGGAT
TCGGTGCGGT CGTTCCTGCA CGAGCACGCG AAGGCCGGCA CCAGCATCGA ACAGCTGGCC
GAGACGTTTG ACGTCGAGCA CATCACCGAG CACCTCTACA CCCGGGGTCT GCCCGATCCC
GATCTGATCA TCCGGACCAG CGGCGAACAG CGCATGTCCG GTTTCCTGCT CTGGCAGTCC
GTCCACTCGG AGTTCTACTT CTGCGAGTTG AATTGGCCGG AATTTCGCCG GGTTGACTTT
CTCCGCGCGT TGCGCTCCTA CGCCACCCGT CAGCGTCGCT TCGGCATCTG A
|
|---|
| Protein sequence | MTLRDVVYSV YERRLTAKLA GKPVPRHVGV MCDGNRRWAR EMGFVDPNDG HRVGAERIKE
LLRWCDAAGV GHVTLWLLST DNLTRPAAQL DPLLQIIEDL TSELAEEANP WRLRMVGALD
VLPAQHAAAL KAAAERTRDR VGGAQVNIAV GYGGRREIAD SVRSFLHEHA KAGTSIEQLA
ETFDVEHITE HLYTRGLPDP DLIIRTSGEQ RMSGFLLWQS VHSEFYFCEL NWPEFRRVDF
LRALRSYATR QRRFGI
|
|---|
| |