Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0861 |
Symbol | |
ID | 5057304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 964053 |
End bp | 965891 |
Gene Length | 1839 bp |
Protein Length | 612 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640473130 |
Product | phosphoenolpyruvate carboxykinase |
Protein accession | YP_001157716 |
Protein GI | 145593419 |
COG category | [C] Energy production and conversion |
COG ID | [COG1274] Phosphoenolpyruvate carboxykinase (GTP) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.473448 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGCTC CGGCCACTGT TCGGGGTATC GATCAGGCCC CGACATCCCA CCCCAAACTG CTTGCCTGGG TCCGTGAGAT CGCGGAACTG ACCACCCCGG ACCGTGTGGT CTGGGCGGAC GGGTCAGAAG AAGAGTGGCG TCGTATCACC GACGAACTCG TCGAGGCTGG CACCCTGGTC CGACTCAACC CGGAGAAGAA GCGCAACTCG TTCTACGCGC GGACCGATCC GACGGATGTG GCGCGCGTTG AGGAGCGCAC CTTCATCTGC TCGGTTGACG AGGCGGACGC CGGCCCGACC AACAACTGGA TGGCGCCGGC CGAGATGAAG CGGACGATGA CGGAGCTGTA CCGCGGCTGC ATGCGTGGTC GCACCATGTA CGTCATCCCC TTCTGCATGG GCCCGGTAGA GGCCAAGAAT CCGATGTTCG GCATCGAGAT CACCGACAGT CCGTACGTGG TCGCCTCGAT GCGGATCATG ACTCGGATGG GCACGAAGAT CCTGGAGGCG ATGGGCGACG ACGCGGACTT CGTGCACGCT CTGCACTCGA TCGGCGCGCC GCTCGCGCCG GGTCAGCAGG ACGTCTCCTG GCCCTGCAAC GAGACGAAGT ACATCTCGCA CTTCCCCGAG ACCCGGGAGA TCTGGTCCTA CGGCTCCGGC TACGGCGGCA ACTCGCTGCT CGGCAAGAAG TGCTACTCGC TGCGGATCGC CAGTGTGATG GGACGCGACG AGGGCTGGCT CGCTGAGCAC ATGCTGATCC TCAAGATCAC CTCTCCGGAG GGGAGGGCCT ACCACATCGC CGGGGCCTTC CCGTCGGCAT GCGGCAAGAC CAACCTCGCC ATGCTGGAGC CGACCATCCC CGGCTGGAAG GTCGAGACCG TCGGGGACGA CATCGCCTGG ATGCGGTTCG GCCCAGACGG ACGCCTCTAT GCGGTCAACC CGGAGTACGG CCTCTTCGGG GTCGCCCCCG GAACCGACTG GAAGACCAAC GCCAACGCGA TGCGGACGTT GGACCGCGGC AACTCCATCT TCACCAACGT GGCCCTCACC GACGACGGTG ACATCTGGTG GGAGGGTATG GGCGAGCCCC CGACGCACCT CATCGACTGG AAGGGCAACG ACTGGACGCC GCAGAGCGAA CACCTCTCCT CGCACGCCAA CAGCCGGTTC TGCACCCCGA TCACCCAGTG CCCGATCCTC GCCGAGGATT ACTACGACCC CAACGGCGTG CCGATTGACG CCATCCTCTT TGGTGGCCGC CGCCGGGACA CCGTTCCACT GGTCACCGAG GCGCGGGACT GGGTGCACGG TGTCTACCTT GGTGCGACGC TCTCCTCGGA GACCACCGCC GCGGCCTCGG GCGCGGTCGG CGTCGTGCGT CGGGACCCGA TGGCGATGCT GCCCTTCATC GGCTACAACG CCGGGGACTA CTTCCGGCAC TGGATCGAGA TGGGCAAGGG TACCGACGGT GACGAGTCGA AGCTGCCGAG CGTCTACTAC GTCAACTGGT TCCGTAAGGA TGCCGAGGGT AGCTTCCTCT GGCCGGGCTT CGGCGAGAAC TCCCGGGTCC TGAAGTGGAT CGTCGAGCGG CTCGAGGGCC GGGCCGAAGC CGTGGAGACC CCGATCGGCA TGGTTCCCGC CGAAGACGCG CTGGACGTCG AGGGCCTGGA CATGACCTCG GAAGACATTC GGATCGCGCT GAAGGTCGAC GTGAACGAGT GGCAGGCCGA ACTGCCGTTG GTCACCGAGT GGTTTGAGAA GTTCGGGGAC AAGCTGCCCG GTGTCCTCTG GGCGGAGCTG GACGCCCTGC GTGCTCGGCT CGACGCGGAG CCGCAGTAG
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Protein sequence | MVAPATVRGI DQAPTSHPKL LAWVREIAEL TTPDRVVWAD GSEEEWRRIT DELVEAGTLV RLNPEKKRNS FYARTDPTDV ARVEERTFIC SVDEADAGPT NNWMAPAEMK RTMTELYRGC MRGRTMYVIP FCMGPVEAKN PMFGIEITDS PYVVASMRIM TRMGTKILEA MGDDADFVHA LHSIGAPLAP GQQDVSWPCN ETKYISHFPE TREIWSYGSG YGGNSLLGKK CYSLRIASVM GRDEGWLAEH MLILKITSPE GRAYHIAGAF PSACGKTNLA MLEPTIPGWK VETVGDDIAW MRFGPDGRLY AVNPEYGLFG VAPGTDWKTN ANAMRTLDRG NSIFTNVALT DDGDIWWEGM GEPPTHLIDW KGNDWTPQSE HLSSHANSRF CTPITQCPIL AEDYYDPNGV PIDAILFGGR RRDTVPLVTE ARDWVHGVYL GATLSSETTA AASGAVGVVR RDPMAMLPFI GYNAGDYFRH WIEMGKGTDG DESKLPSVYY VNWFRKDAEG SFLWPGFGEN SRVLKWIVER LEGRAEAVET PIGMVPAEDA LDVEGLDMTS EDIRIALKVD VNEWQAELPL VTEWFEKFGD KLPGVLWAEL DALRARLDAE PQ
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