| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0857 |
|---|
| Symbol | |
|---|
| ID | 5057300 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 960745 |
|---|
| End bp | 961620 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640473126 |
|---|
| Product | biotin--acetyl-CoA-carboxylase ligase |
|---|
| Protein accession | YP_001157712 |
|---|
| Protein GI | 145593415 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0340] Biotin-(acetyl-CoA carboxylase) ligase |
|---|
| TIGRFAM ID | [TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.198933 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGGTT CCCCGTACAC CGATCTGGAT CGCCCGCCGC TGTCGGCGGT GCGGCTGCGT
CGCGCGTTGG TCGCGCCGCA TGGTCCGTGG GCCCGGCTGG AGCTTCTGGC CGAGACCGGT
TCGACCAACG CGGACGTGGC CGAGTACGCC CGTTCCGGGG AGCCGGAGGG CCTAGTGCTG
GTCGCGGAGC GGCAGAGCGC GGGGCGGGGC CGGCGGGGCC GCGAGTGGCA GTCGCCGGCT
CGGGCGGGCA TCGCCACCAG CGTCCTGCTT CGGCCGGGGG AGGCGGTGGC CGAGCGGGGC
TGGGCACCGG TGCCACCGTC GGCGTACGGG TGGTTGCCGC TGCTCGCCGG GGTGGCGCTG
GTGGAGGCGG TGACCCGGCT GGCCGAGCTG GAGGCCACCC TGAAGTGGCC GAACGATCTG
CTCGTCGGTG CGGCGAAGTG CGGCGGGATC CTGGCCGAGG GGGTGCCGGC GGTGGGCGTG
GCGGCGGCAC CCGCGATCGT CCTTGGCATC GGCCTGAACG TGACTCTTCG TGCTGATGAG
TTGCCGGAGA ACCCGACCGG CCTTCCGGCG ACCTCGCTGC GGTTGGCCGG CGCCGCGGCG
ACCGACCGGG ATCCGCTGCT GCGGGCGCTG CTCCGGTCGT TGGGCGACTG GTATGAGCGT
TGGCGGGCTG CTGAGGGCAG TGCGGTGGCG AGTGGGCTGC GAGCGGCCTA CCTGGGCGTC
TGTGCCACCG TGGATCGTCC GGTCCGGGTG CTGCTGCCGG ATGGTGGCGA GCTGACCGGC
ACGGCGACCG GCGTTGACCC GGACGGCCAG TTGGTGGTGG CCACCCCAGA GGCCACCCGA
CACCTCTCCG CCGGCGACAT CCTGCACCTG CGCTGA
|
|---|
| Protein sequence | MPGSPYTDLD RPPLSAVRLR RALVAPHGPW ARLELLAETG STNADVAEYA RSGEPEGLVL
VAERQSAGRG RRGREWQSPA RAGIATSVLL RPGEAVAERG WAPVPPSAYG WLPLLAGVAL
VEAVTRLAEL EATLKWPNDL LVGAAKCGGI LAEGVPAVGV AAAPAIVLGI GLNVTLRADE
LPENPTGLPA TSLRLAGAAA TDRDPLLRAL LRSLGDWYER WRAAEGSAVA SGLRAAYLGV
CATVDRPVRV LLPDGGELTG TATGVDPDGQ LVVATPEATR HLSAGDILHL R
|
|---|
| |