| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0854 |
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| Symbol | |
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| ID | 5057297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 957652 |
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| End bp | 958152 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640473123 |
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| Product | sigma-70, region 4 type 2 |
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| Protein accession | YP_001157709 |
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| Protein GI | 145593412 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02983] RNA polymerase sigma-70 factor, sigma-E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.699676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGGATG TCGAGGGGTT CGACGAGTTC TACCGGGGGA GCCGGCAGCG GCTGCTCGGC
TTTGTGTGTG TGCTCACCGG TGATCTCAGC GAGGCCCAGG ATGCGGTGCA GGAGGCGTAC
ATCCGGGCCT GGCAGCGCTG GTCAACGGTG AGCGGGTACG ACGACCCGGA GGCGTGGGTG
CGGGTGGTGG CGAGCCGGAT CGCGGTCAGC CGGTGGCGTA GCCTGCGTAG CCGGGCGCGG
GCGTACCTGC GGCACGGTGC CGCCGAAAGC GTCCCCGCGC CAAGCACCGA CACGGTGGCG
GTGGTCGCCG CGCTGCGCCG GCTGCCGGAG GAGCAGCGCA TCGCGATCGC GCTCTACTAC
CTGGTGGGGA TGCCCGTCGT CGAGGTCGCC CGGGAGACCA ACGCCCCGGT CGGCACCGTC
AAGGCCCGGC TGGCTCGCGG CCGGGCCGCT CTCGCCGGGC TACTTGCCGT CGCCGACCTG
GAGGAGGCCG TCGATGCATG A
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| Protein sequence | MPDVEGFDEF YRGSRQRLLG FVCVLTGDLS EAQDAVQEAY IRAWQRWSTV SGYDDPEAWV
RVVASRIAVS RWRSLRSRAR AYLRHGAAES VPAPSTDTVA VVAALRRLPE EQRIAIALYY
LVGMPVVEVA RETNAPVGTV KARLARGRAA LAGLLAVADL EEAVDA
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