| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0850 |
|---|
| Symbol | |
|---|
| ID | 5057293 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 952297 |
|---|
| End bp | 952950 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640473119 |
|---|
| Product | caffeoyl-CoA O-methyltransferase |
|---|
| Protein accession | YP_001157705 |
|---|
| Protein GI | 145593408 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4122] Predicted O-methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.835766 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACCACCA AGTCCATCCC GTTGACATCG GAGTTGCACG CCTACCTGGT CGCCCACGGC
AGCCCACCGG ATGAGGTCAT GCTCGACCTG ATCAAGGAGA CCCGGGCACA CCTGCCGGAG
GACGCGCAGA TGCAGGTGGC GCCGGAGCAG GCCGCGTTCC TGACCTTTCT GACCCGGCTG
CTGGGGGCAC GACAGGCAGT CGAGGTCGGC ACCTTTACCG GGCTCTCCGC GCTGGCTATC
GCCCGCGGGC TTGCCGAGGA CGGGCAGCTG ACCTGCTTCG ACGTCTCGGA GGAGTTCACC
GGGATCGCTC GGCGCTACTG GACCCGGGCT GGCGTGGACG ACCGGGTGCA GCTGCGCATC
GGCCCGGCCG AGGAGACGCT GCGGGAACTA CCGGGCGACC GTCACCTCGA CTTCGCTTTC
ATCGACGCGG ACAAGGTCGG CTATTCGGCG TACTGGGCGG AGCTGGTGCC CCGGATGCGG
CCCGGCGGGG TGATCGCCGT CGACAACGTC CTTCGCGACG GCCGGGTGCT CGCCCCGCAG
GACGCCGGCG ACCGGGCCAT CGCCGCGTTC AACGACGAGG TACTGGCCGA CGTTCGGGTC
GACCCGATGA TGCTGCCGAT CGCCGACGGG TTGACCCTGG CCCGAGTGCA CTGA
|
|---|
| Protein sequence | MTTKSIPLTS ELHAYLVAHG SPPDEVMLDL IKETRAHLPE DAQMQVAPEQ AAFLTFLTRL
LGARQAVEVG TFTGLSALAI ARGLAEDGQL TCFDVSEEFT GIARRYWTRA GVDDRVQLRI
GPAEETLREL PGDRHLDFAF IDADKVGYSA YWAELVPRMR PGGVIAVDNV LRDGRVLAPQ
DAGDRAIAAF NDEVLADVRV DPMMLPIADG LTLARVH
|
|---|
| |