| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0843 |
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| Symbol | |
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| ID | 5057286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 943565 |
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| End bp | 945298 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640473112 |
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| Product | ABC transporter related |
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| Protein accession | YP_001157698 |
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| Protein GI | 145593401 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.880512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.181945 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTGATCC AACTGCTCCG CACCTACCTA CGCCCTTACC ACCGCCCGCT GGCGGCCGTG
GTCGTCCTCC AGTTCGTCGG CACCATCGCC TCGCTCTACC TGCCGAGCCT CAACGCCGAC
ATCATCGACC TTGGGGTGGC CCGCGGCGAC ACCGGCTTCA TCGTGCGCAC CGGGGCCTGG
ATGCTCGTCG TCAGCCTGGT GCAGATCGTC TGCTCGATCG CCGCCGTCTA CCTGGGCGCC
CGCACCGCGA TGGCGTACGG CCGGGATGTC CGCGCGGCGC TCTTCGCCCA CGTCAACAGC
TTCTCCGCGC GGGAGGTCGC CCACTTCGGC GCACCATCAC TGATCACTCG CAACACCAAC
GACGTGCAGC AGGTGCAGAT GCTGGTGCTG ATGAGCTGCA CGATGCTGGT CGCCGCGCCG
ATCATGAGCG TCGGCGGGGT GGTGATGGCG CTCCGCGAAG ACCTCGGGCT CTCCTGGCTG
CTGCTGGTCA GCGTCCCAGT CCTGGCCCTC GGCCTGGGCC AGGTGATCCG GCGGATGGTG
CCCGGATTCC GACTCATGCA GACCCGCATC GACGCGGTTA ACCGGGTTCT CCGCGAGCAG
ATCAGTGGCA TCCGCGTGGT CCGGGCGTTC GTTCGGGAAC CGTACGAGAC CCGCCGCTTC
GCCGCCGCCA ACACCGACCT GACCGCGACC GCCCTACACA CCGGCCGACT GGCAGCACTG
GTCTTCCCGA TCGTGATGCT GGTCCTCAAC GTCTCCAGCG TCGCGGTGCT CTGGTTCGGG
GCCGGACGGG TGGACGCCGG CGCCATCGAG GTCGGCTCCC TCACCGCCTT CCTCCAGTAC
CTGATGCAGA TCCTGATGGC GGTCATGATG GCCACGTTCA TGCTGATGAT GGTGCCGAGG
GCGGCGGTTT GCGCCGAGCG CATCGGCGAG GTGCTGGCGA CCGAGACCTC GGTCACGCCC
CCACCGGAGC CGGTCACCGC ACCGCCCGGC CGAGCTGAGG TGGAGCTGCG CACGGTGCGG
TTCCAGTACC CGGGCGCGGC CGAACCGGTG CTGCGGGACG TGTCGTTCCG GGTGACCCCG
GGCACGACCA CCGCGATCAT CGGCAGCACC GGCGCCGGCA AGAGCACCCT GCTCGCCCTG
ATCTCACGGT TGATCGACGT TACCTCCGGT GCGGTGCTGG TGGACGGGGT CAATGTCCGG
GAGCTCGCAC CGGAGGCGCT GTGGCAGCGA ATCGGGCTGG TGCCACAGCG CCCGTACCTG
TTCACCGGCA CGATCGCCAG CAACCTGCGA CACGGCAACC CGGACGCGAC CGAGGCCGAG
CTGTGGGCGG CGCTGGAGGT GGCACAGGCA CGCGACTTCG TCGCGGCGAT GCCGGACGGG
CTGGACGCAC CCGTAGCGCA GGGTGGCACC AACCTCTCCG GCGGGCAGCG GCAGCGGCTG
GCCATCGCCC GGGCGCTGGT GCGCCGACCA GAGATTTACC TCTTCGACGA CTCCTTCTCC
GCCCTTGACC TCGGTACCGA CGCGCGGCTG CGGGCGGCAC TGCGCCCAGT CACCGCCGAC
GCGGCGGTGG TGGTCGTGGC GCAGCGGGTC GCCACCGTGG CAGACGCCGA CCGGATCGTG
GTGCTGGAGA ACGGGGGCGT CGTGGGGATC GGCCAGCACG CCGAGCTACT GACGACCTGC
CCCACGTACG CGGAGATCGT CGCATCACAG CAGAGCACGG GGGTGACGGC ATGA
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| Protein sequence | MLIQLLRTYL RPYHRPLAAV VVLQFVGTIA SLYLPSLNAD IIDLGVARGD TGFIVRTGAW
MLVVSLVQIV CSIAAVYLGA RTAMAYGRDV RAALFAHVNS FSAREVAHFG APSLITRNTN
DVQQVQMLVL MSCTMLVAAP IMSVGGVVMA LREDLGLSWL LLVSVPVLAL GLGQVIRRMV
PGFRLMQTRI DAVNRVLREQ ISGIRVVRAF VREPYETRRF AAANTDLTAT ALHTGRLAAL
VFPIVMLVLN VSSVAVLWFG AGRVDAGAIE VGSLTAFLQY LMQILMAVMM ATFMLMMVPR
AAVCAERIGE VLATETSVTP PPEPVTAPPG RAEVELRTVR FQYPGAAEPV LRDVSFRVTP
GTTTAIIGST GAGKSTLLAL ISRLIDVTSG AVLVDGVNVR ELAPEALWQR IGLVPQRPYL
FTGTIASNLR HGNPDATEAE LWAALEVAQA RDFVAAMPDG LDAPVAQGGT NLSGGQRQRL
AIARALVRRP EIYLFDDSFS ALDLGTDARL RAALRPVTAD AAVVVVAQRV ATVADADRIV
VLENGGVVGI GQHAELLTTC PTYAEIVASQ QSTGVTA
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