Gene Strop_0830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0830 
Symbol 
ID5057273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp924613 
End bp926319 
Gene Length1707 bp 
Protein Length568 aa 
Translation table11 
GC content73% 
IMG OID640473099 
Productphosphoglucomutase/phosphomannomutase alpha/beta/subunit 
Protein accessionYP_001157685 
Protein GI145593388 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0955445 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTATCAA GAGGCATGTC GGCGGATCAC CAGCACCTCA ATGACCTTCA CGAGCAGGCC 
CAACGGTGGC TCGATGACGA TCCGGACCCG GCCAGCCGCG CCGAGCTACA GGCGGTGCTC
GACCGGCTTC CGGCCAGCGC CCCGGAGCTG GCCGACCGCT TTGCCGGCCC GCTGACCTTC
GGCACCGCAG GCCTACGCGG CCCGTTGCGC GCCGGCCCGA ACGGAATGAA CCTCGCCGTG
GTCACGCAGG CCGCCGCCGG GCTGGTCGCC TGGCTGACAG CCCAGGGTGG CACCGGCCCA
CTGGTGATCG GGTACGACGC CCGAACCGGC TCCCGCGCCT TCGCGGAACG GACGGCGCAG
GTCGCCACCG GCGCTGGCCG TCCGGCGCTG CTGCTCCCCC GGCCGCTGCC GACACCGGTG
CTGGCCCATG CGGTGCGCCA GCACGAGGCG GTCGCCGGGG TGATGGTGAC AGCCAGCCAC
AACCCGCCCC AGGACAACGG CTACAAGGTC TACCTGGGCG CCCAACTCGG TGGTGCACTG
GGCGCGGGGG CGCAGATCGT ACCGCCGGCG GACGCCGAGA TCGAGTCGGC CATCCGCGCG
GTCGGCCCGC TGGCAGACGT ACCACTGGGC CCTCGCGGGC AGCTCCTCGA CGACACCCTG
GTGGAGGCGT ACGTGCAGCA GGCCGTCGCG GTGATCGCAC CGGGCGGGCC GCGCGACCTG
AAGGTGGCGT ACACGCCGCT ACACGGAGTC GGCGCAGCGG TGCTCACCGC GGCGTTCACC
CGCGCCGGCT TCCCCACCCC ACCGCTCGTG CCGGACCAGG CCGAACCGGA CCCGAGGTTC
CCCACGGTCG CCTTCCCCAA CCCGGAGGAG CCCGGTGCCG TTGACCGGCT CACCGCCCTG
GCCGACGAGA CCGGTGCCGA CATCGCGATC GCCAACGACC CGGACGCGGA CCGCTGCGCG
GTGGTGATCC GGGAGCCGGC CAACTCGGCC GCGAACCGGG ACGCCCCCGG GTGGCGGATG
CTCCGTGGTG ACGAGGTGGG GGCGCTCCTC GCCGACCATC TGATGCGACG CGGCCGAACC
GGCCTCTACG CGACCACGAT CGTGTCGTCG GCGCTCCTGC GCGCGATGTG CACCGCCCGC
GACCTCCCGT ACGACGAGAC CCTGACCGGG TTCAAGTGGA TCGTCCGGGC CGGCGGGGGG
TCCACCCCGC TGGTCTACGG CTACGAGGAG GCACTGGGCT ACTGCGTCGC CCCCGACCAT
GTCCGGGACA AGGACGGCAT CACCGCCGCG CTGACCATCG CCGAACTCGC CGCGGAGCTC
AAGGCGGAGG GGCGTAGCCT CGCCGACCGG CTGGACGAGT TGGCGGCCGA GTTCGGCGTG
CACCACACCG ACCAGCTCTC GGTACGGGTG GACGACCTAC AGGTGATCAC AGATGCGATG
GCCCGAATCC GCGCCGCGAC CCCGAGCACG CTGCTCGGGG AGCCGCTCAT CGAGTCCCAG
GACCTGCTCC CGGCGGCCGA TGTGGTGATC CTGCGCAGCG CGTCCGCCCG GGTGGTGATC
CGTCCGTCCG GCACCGAACC GAAGCTCAAG GCGTACCTGG AGGTGGTGCA GCCGGTCGTG
GCGGGTGACA TCGCCGCGGC CCGCCGCCAC GCTGCCACGG CCGTCGCCGA GTTGCGCGCC
GAGATCGCCG CCAGCTTGGG GGTGTAG
 
Protein sequence
MLSRGMSADH QHLNDLHEQA QRWLDDDPDP ASRAELQAVL DRLPASAPEL ADRFAGPLTF 
GTAGLRGPLR AGPNGMNLAV VTQAAAGLVA WLTAQGGTGP LVIGYDARTG SRAFAERTAQ
VATGAGRPAL LLPRPLPTPV LAHAVRQHEA VAGVMVTASH NPPQDNGYKV YLGAQLGGAL
GAGAQIVPPA DAEIESAIRA VGPLADVPLG PRGQLLDDTL VEAYVQQAVA VIAPGGPRDL
KVAYTPLHGV GAAVLTAAFT RAGFPTPPLV PDQAEPDPRF PTVAFPNPEE PGAVDRLTAL
ADETGADIAI ANDPDADRCA VVIREPANSA ANRDAPGWRM LRGDEVGALL ADHLMRRGRT
GLYATTIVSS ALLRAMCTAR DLPYDETLTG FKWIVRAGGG STPLVYGYEE ALGYCVAPDH
VRDKDGITAA LTIAELAAEL KAEGRSLADR LDELAAEFGV HHTDQLSVRV DDLQVITDAM
ARIRAATPST LLGEPLIESQ DLLPAADVVI LRSASARVVI RPSGTEPKLK AYLEVVQPVV
AGDIAAARRH AATAVAELRA EIAASLGV