Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0828 |
Symbol | |
ID | 5057271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 922734 |
End bp | 923744 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640473097 |
Product | deoxyribose-phosphate aldolase |
Protein accession | YP_001157683 |
Protein GI | 145593386 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0274] Deoxyribose-phosphate aldolase |
TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0758191 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCGA CAGCGATGTC GGCCCGGTCG GACCTGACCG AGCTGGGACG ATCCGAGACC GCTCTCCGGG CGTTCCTCCA CGGGCTGCCC GGCGTGGACC AGGTCGGCGC GGAGCAGCGG GCGGCGCAGC TCGGCACCCG TTCGATCAAG GCCACGGCGA AGGCCTGGGC GATCGACCTG GCAATCCGAA TGGTCGACCT GACCACCCTG GAAGGGGCCG ACACCCCCGG CAAGGTTCGG GCACTCGCCG CCAAGGCCCT CCGCCCCGAC CCCGCCGACC CGTCCTGTCC GCACGTCGGC GCCGTCTGCG TCTATCCGTC GATGGTCCCG CATGTGGCCG AGGTACTCCG CGGGCCCGCC AGCGGGGCAG GAGCGGCCGG CGACGGAGCA GCGCCAGCCG GCGCCGGCGT GGTGCACCTG GCCAGCGTGG CGACCGCCTT CCCCTCCGGC CAGGCGCCGC TGGAGGTCAA GCTCGCCGAC ACCCGGGCAG CGGTCGCGGC CGGCGCCGAC GAGATCGACA TGGTGCTCAA CCGGAGCGCC TTCCTGACCG GCCGATACCA GGAGGCCTAC GACGAGATCG TGGCCACCCG GGAGGCCTGC GGCACCGCCC ACCTCAAGGT GATCCTGGAG ACCGGGGAGC TGTCCACCTA CGACAACGTC CGCCGCGCGT CCTGGCTCGC CATGCTGGCC GGTGCTGACT TCATCAAGAC CTCCACCGGC AAGGTCCCGG CGGCGGCCAC CCCGCCGGTG ACGCTGGTGA TGCTGGAAGC GGTCCGGGAC TTCCGTGCCG CGACCGGACG ACAGGTCGGC GTGAAACCGG CCGGCGGCAT CAAGACCACC AAAGACGCCA TCAGATACCT CGTGCTGGTC AACGAGACCG TCGGCCCGGA CTGGCTGAAC CCGGACTGGT TCCGGTTCGG CGCCTCCAGC CTCCTCAACG ACCTGCTGAT GCAGCGCACC AAACTGACGA CCGGCGACTA CGCCGGTCCC GACTACTTCA CCCAGGACTG A
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Protein sequence | MTATAMSARS DLTELGRSET ALRAFLHGLP GVDQVGAEQR AAQLGTRSIK ATAKAWAIDL AIRMVDLTTL EGADTPGKVR ALAAKALRPD PADPSCPHVG AVCVYPSMVP HVAEVLRGPA SGAGAAGDGA APAGAGVVHL ASVATAFPSG QAPLEVKLAD TRAAVAAGAD EIDMVLNRSA FLTGRYQEAY DEIVATREAC GTAHLKVILE TGELSTYDNV RRASWLAMLA GADFIKTSTG KVPAAATPPV TLVMLEAVRD FRAATGRQVG VKPAGGIKTT KDAIRYLVLV NETVGPDWLN PDWFRFGASS LLNDLLMQRT KLTTGDYAGP DYFTQD
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