Gene Strop_0828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0828 
Symbol 
ID5057271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp922734 
End bp923744 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content71% 
IMG OID640473097 
Productdeoxyribose-phosphate aldolase 
Protein accessionYP_001157683 
Protein GI145593386 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0274] Deoxyribose-phosphate aldolase 
TIGRFAM ID[TIGR00126] deoxyribose-phosphate aldolase 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0758191 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGA CAGCGATGTC GGCCCGGTCG GACCTGACCG AGCTGGGACG ATCCGAGACC 
GCTCTCCGGG CGTTCCTCCA CGGGCTGCCC GGCGTGGACC AGGTCGGCGC GGAGCAGCGG
GCGGCGCAGC TCGGCACCCG TTCGATCAAG GCCACGGCGA AGGCCTGGGC GATCGACCTG
GCAATCCGAA TGGTCGACCT GACCACCCTG GAAGGGGCCG ACACCCCCGG CAAGGTTCGG
GCACTCGCCG CCAAGGCCCT CCGCCCCGAC CCCGCCGACC CGTCCTGTCC GCACGTCGGC
GCCGTCTGCG TCTATCCGTC GATGGTCCCG CATGTGGCCG AGGTACTCCG CGGGCCCGCC
AGCGGGGCAG GAGCGGCCGG CGACGGAGCA GCGCCAGCCG GCGCCGGCGT GGTGCACCTG
GCCAGCGTGG CGACCGCCTT CCCCTCCGGC CAGGCGCCGC TGGAGGTCAA GCTCGCCGAC
ACCCGGGCAG CGGTCGCGGC CGGCGCCGAC GAGATCGACA TGGTGCTCAA CCGGAGCGCC
TTCCTGACCG GCCGATACCA GGAGGCCTAC GACGAGATCG TGGCCACCCG GGAGGCCTGC
GGCACCGCCC ACCTCAAGGT GATCCTGGAG ACCGGGGAGC TGTCCACCTA CGACAACGTC
CGCCGCGCGT CCTGGCTCGC CATGCTGGCC GGTGCTGACT TCATCAAGAC CTCCACCGGC
AAGGTCCCGG CGGCGGCCAC CCCGCCGGTG ACGCTGGTGA TGCTGGAAGC GGTCCGGGAC
TTCCGTGCCG CGACCGGACG ACAGGTCGGC GTGAAACCGG CCGGCGGCAT CAAGACCACC
AAAGACGCCA TCAGATACCT CGTGCTGGTC AACGAGACCG TCGGCCCGGA CTGGCTGAAC
CCGGACTGGT TCCGGTTCGG CGCCTCCAGC CTCCTCAACG ACCTGCTGAT GCAGCGCACC
AAACTGACGA CCGGCGACTA CGCCGGTCCC GACTACTTCA CCCAGGACTG A
 
Protein sequence
MTATAMSARS DLTELGRSET ALRAFLHGLP GVDQVGAEQR AAQLGTRSIK ATAKAWAIDL 
AIRMVDLTTL EGADTPGKVR ALAAKALRPD PADPSCPHVG AVCVYPSMVP HVAEVLRGPA
SGAGAAGDGA APAGAGVVHL ASVATAFPSG QAPLEVKLAD TRAAVAAGAD EIDMVLNRSA
FLTGRYQEAY DEIVATREAC GTAHLKVILE TGELSTYDNV RRASWLAMLA GADFIKTSTG
KVPAAATPPV TLVMLEAVRD FRAATGRQVG VKPAGGIKTT KDAIRYLVLV NETVGPDWLN
PDWFRFGASS LLNDLLMQRT KLTTGDYAGP DYFTQD