Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0825 |
Symbol | |
ID | 5057268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 920000 |
End bp | 920434 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640473094 |
Product | penicillinase repressor |
Protein accession | YP_001157680 |
Protein GI | 145593383 |
COG category | [K] Transcription |
COG ID | [COG3682] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.118786 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCCGGC TCGGCGAGCT CGAACGCGCA GTGATGGATG TGTTGTGGGA CCTGTTCCCC GGCAGATCAG ACGGGCTCAT GGTGCGGGAG GTCGTCGATG CCCTCGCCGG ACGCGAGCTG GCCTACACCA CCGTGCTGAC CGTGTTGGAC CGGCTCTCCG GCAAGGGCAT GGTGCTACGG GAACGCGAGG GGCGGGCCTG GCGGTACCGG GCCGCCGCAA GCCGGGAGGC GCACATCGCC CAACTCATGC TCGACGCGCT GGACCTCGGC GGTAGTCGAG ACGCCGCCCT GGTGCGCTTC GCCCGATCGG TGACGGGCAC CGAGGCGGAG GTGCTGCGCG CCGCGCTGAA CGCGGCGGGC GAGCCCAGCG CGCCGGCCAG CCCCGCCACA CCGGCCACCC CCGTCACACC GGCTGCCAAG GCGCCGGAGC GCTAG
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Protein sequence | MTRLGELERA VMDVLWDLFP GRSDGLMVRE VVDALAGREL AYTTVLTVLD RLSGKGMVLR EREGRAWRYR AAASREAHIA QLMLDALDLG GSRDAALVRF ARSVTGTEAE VLRAALNAAG EPSAPASPAT PATPVTPAAK APER
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