Gene Strop_0825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0825 
Symbol 
ID5057268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp920000 
End bp920434 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content73% 
IMG OID640473094 
Productpenicillinase repressor 
Protein accessionYP_001157680 
Protein GI145593383 
COG category[K] Transcription 
COG ID[COG3682] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.118786 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCGGC TCGGCGAGCT CGAACGCGCA GTGATGGATG TGTTGTGGGA CCTGTTCCCC 
GGCAGATCAG ACGGGCTCAT GGTGCGGGAG GTCGTCGATG CCCTCGCCGG ACGCGAGCTG
GCCTACACCA CCGTGCTGAC CGTGTTGGAC CGGCTCTCCG GCAAGGGCAT GGTGCTACGG
GAACGCGAGG GGCGGGCCTG GCGGTACCGG GCCGCCGCAA GCCGGGAGGC GCACATCGCC
CAACTCATGC TCGACGCGCT GGACCTCGGC GGTAGTCGAG ACGCCGCCCT GGTGCGCTTC
GCCCGATCGG TGACGGGCAC CGAGGCGGAG GTGCTGCGCG CCGCGCTGAA CGCGGCGGGC
GAGCCCAGCG CGCCGGCCAG CCCCGCCACA CCGGCCACCC CCGTCACACC GGCTGCCAAG
GCGCCGGAGC GCTAG
 
Protein sequence
MTRLGELERA VMDVLWDLFP GRSDGLMVRE VVDALAGREL AYTTVLTVLD RLSGKGMVLR 
EREGRAWRYR AAASREAHIA QLMLDALDLG GSRDAALVRF ARSVTGTEAE VLRAALNAAG
EPSAPASPAT PATPVTPAAK APER