Gene Strop_0824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0824 
Symbol 
ID5057267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp919086 
End bp919991 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content72% 
IMG OID640473093 
Productpeptidase M48, Ste24p 
Protein accessionYP_001157679 
Protein GI145593382 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0710796 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTACG CGCTGCACTT CGGGCTCGCG GTGCTGGCCT GCTGGCTAAC CGCACAGGTG 
ATGGCCCGTT CGACCTGGAC CTGGCGTAGC CCGCGGGTGG CCATTCTCTG CTGGCAGGCG
ATCGGCCTGG CGGCTGGCCT GGCGGCGATG GGTCTCCCGA TGGCCCTCGG CCTGGCCGCA
TACGACCTGC CGACCGGAAG CGCCCTCTGG GCCCTCGCCG GGGAGCTGCG CGGCGGCGCC
GCACCGATTA GGGTAAACGC GCTCCAGCTC GGGCTCGTCG GTCTCGGCTG CGGAATCGGC
GTCGTGCTGT TCACCACCAC CCTCCGCAGC CTGCACAGCG CCGTCCGGGC CCAACGCCGC
CATCGGGATC TGCTCACGCT GGTGGCCCGG CAGGATCCGA CGGTGCCCGG TGCGCTGGTG
CTCGACCATC CGAGCGCGGC CGCGTACTGC CTGCCCGGGG TACGGCCTCG GGTCGTGGTC
AGTGCCGGCG CCCTCGACCT GCTGGACCAG GCCGAACTGG CGGCCGTACT CACCCACGAG
CGGGCCCACG CCCAGGAACG GCACGATCTC GTCCTGTTGC CGTTCACCGC GCTCCGCCGG
GTGCTGCCCT GGTTCCGCTG GGTACGGGAC GCACACGAGC GAGTCGCCCT GCTCGTCGAG
ATGCGTGCCG ATGACAAGGC CCGCGAGCTA CACGCCGAGG CACCCCTGGC GGGCGCACTG
CGCCGGTTCG CCGCTGCTGG TGACCGGCTC GCCCCGGCCG GCACCCTGGG CATCGGTGAC
CACGACCTCG AACTGCGGGT CCACCGGCTG CTGGAGTCGG GGCGACCGCC CCGGCTGGTC
GGCACCGCCG CACTAGCAGT GACGACCACG CTGGTCGCCC TACCGGTGTC GCTGTTCCTG
AGTTGA
 
Protein sequence
MTYALHFGLA VLACWLTAQV MARSTWTWRS PRVAILCWQA IGLAAGLAAM GLPMALGLAA 
YDLPTGSALW ALAGELRGGA APIRVNALQL GLVGLGCGIG VVLFTTTLRS LHSAVRAQRR
HRDLLTLVAR QDPTVPGALV LDHPSAAAYC LPGVRPRVVV SAGALDLLDQ AELAAVLTHE
RAHAQERHDL VLLPFTALRR VLPWFRWVRD AHERVALLVE MRADDKAREL HAEAPLAGAL
RRFAAAGDRL APAGTLGIGD HDLELRVHRL LESGRPPRLV GTAALAVTTT LVALPVSLFL
S