| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0823 |
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| Symbol | |
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| ID | 5057266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 917312 |
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| End bp | 918988 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640473092 |
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| Product | ABC transporter, transmembrane region, type 1 |
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| Protein accession | YP_001157678 |
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| Protein GI | 145593381 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
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| TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0882917 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCGTC GTCCCTTCGA TCCACGTCTG CTGCGACGGG TCCCCGCGGC CCGGCGCGAC
CTCGCCGTGC TCGCGCTCCT CGGCGTACTC GCCGCGGGCC TGGTGCTGGC GCAGGCGACT
GCGCTCGCCG CGCTGCTCGC CACCGCCTTC GACGGGCAGC TCAACCGGCC TGCGCTGGCC
GCCTTCGTCG CCGCGATCAG CGCCCGGTCA CTGCTGGTAT GGGCGCAGGG GACCGTGTCG
GCACGGGTCG CCGCGACGGT CAAGGCAGCG CTGCGGGCCG AGCTGCTCGC CGCGGTCGGT
CGACGCGGCC CGACCTGGGT CGCCGGGCAG CGGGCGGGAC AGCTGGCAAC GCTGGCCGGG
CGGGGGCTGG ACGCGCTGGA CGCTTACTTC ACCGGCTACC TGCCACAACT CGTACTCAGC
GTCACGGTGC CGATCGCCGT GCTCGCGCGG ATCTTCGTCG CCGACTGGAG TTCCGCCGTC
ATCATCGCGA TCACCCTCCC CCTCATTCCG ATCTTCGGAG CGCTGCTCGG CTGGCAGGCG
CAGGCTGCGA CGGAACGTCA GTGGCGGCGG CTGGCGCTGC TCGGCGGGCA CTTCCTCGAC
ATGATTGCCG GGCTCCCGAC GCTGCGGACC TTCGGCCGTG CCCGGGGGCA GACCGAGGTG
GTCCGCCGGA TGGCCGACGG GCACCGGGTG GCAACCATGC GGACGCTGCG CATCGCGTTC
CTCTCCGCAC TGGTGCTGGA GTTGGTCGCC ACCCTCTCCG TCGCGCTGGT AGCGGTGCCG
GTCGGCGTCC GACTGCTCGG CGGCGGACTG ACCTTGCAGA CCGCGCTGCT GGTGTTGCTA
CTCACCCCCG AGGCGTACCT GCCGTTGCGG ACTGCCGGCA GCCGCTTCCA CGCCAGCATG
GAGGGGCTCA CCGCGCTGGA CGAGGCACTT ACCCTCTCCG CCACGGCACC CGACGCCGAC
ACCGGAGCGG GCCCGGCCGA GCCGGACGGC CGGGGCGTGA TCCGGTTCGA GGGCGTCACC
GTCGCCTACG ACCGGACCAC GGCGCTGCGT GATGTCACGC TGACCATCCG GCCCGGCGAG
CGGATCGCGG TGGTCGGGCC GAGCGGCGCC GGCAAGAGCA CCTTGCTGAA TCTGCTGCTC
GGATTTGTGT CACCCACCTC CGGCCGGGTC ACCGTGGACG GCGTCGACCT GGCCCAGGCT
GACCTGGACG CCTGGCGCCG CCACCTCGCC TGGGTTCCGC AGCGGGCCCA CCTCTTCGCC
GCCTCACTGG CGGACAACAT CCGTCTCGGC GCCCCCGATA CGCCCGACGC CGCGTTGGCC
GACGCCGTGC GGGACGCCGC GCTGACCGAT GTCGTCGCCG CCCTTCCCGA CGGGCTGGCC
ACCCGCCTCG GTGAACGGGG GTACGGCCTC TCCAGCGGTC AACGACAACG GGTCGCGCTG
GCCCGTGCCT TCCTACGGGA CGCGCCGGTG GTGCTGCTCG ACGAGCCGAC TGCCCGCCTG
GACTCGGGGA GCGAGTCAGC CGTCCTCCAG GCCACCCGCA CGCTGGTGGC CGGCCGCACG
GCGCTGCTGG TGGCCCACCG TCCCGCGCTG CTGGCCGACG CGGACCGTGT GCTGCGGGTC
GCCGACGGAC GGATCACCGA GCTCACCCCG ACCCCCGCCG GAGGGACTAC CCGATGA
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| Protein sequence | MNRRPFDPRL LRRVPAARRD LAVLALLGVL AAGLVLAQAT ALAALLATAF DGQLNRPALA
AFVAAISARS LLVWAQGTVS ARVAATVKAA LRAELLAAVG RRGPTWVAGQ RAGQLATLAG
RGLDALDAYF TGYLPQLVLS VTVPIAVLAR IFVADWSSAV IIAITLPLIP IFGALLGWQA
QAATERQWRR LALLGGHFLD MIAGLPTLRT FGRARGQTEV VRRMADGHRV ATMRTLRIAF
LSALVLELVA TLSVALVAVP VGVRLLGGGL TLQTALLVLL LTPEAYLPLR TAGSRFHASM
EGLTALDEAL TLSATAPDAD TGAGPAEPDG RGVIRFEGVT VAYDRTTALR DVTLTIRPGE
RIAVVGPSGA GKSTLLNLLL GFVSPTSGRV TVDGVDLAQA DLDAWRRHLA WVPQRAHLFA
ASLADNIRLG APDTPDAALA DAVRDAALTD VVAALPDGLA TRLGERGYGL SSGQRQRVAL
ARAFLRDAPV VLLDEPTARL DSGSESAVLQ ATRTLVAGRT ALLVAHRPAL LADADRVLRV
ADGRITELTP TPAGGTTR
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